DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhe and Nceh1

DIOPT Version :10

Sequence 1:NP_523758.3 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001120996.1 Gene:Nceh1 / 294930 RGDID:1311104 Length:408 Species:Rattus norvegicus


Alignment Length:276 Identity:64/276 - (23%)
Similarity:109/276 - (39%) Gaps:76/276 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 DEDCLYLNVY----RPE--IRKSALPVMVYIHGGGFFGGSAGPGVTGPEYF-------MDSGEVI 161
            |.|.:.:.|:    :|:  :|:|    :|||||||:...||     ...|:       .:....:
  Rat    86 DFDGVEVRVFEGPPKPDEPLRRS----VVYIHGGGWALASA-----KISYYDQLCTAMAEELNAV 141

  Fly   162 LVTMAYRLGPFGFLSTQ--DAVMSGNFGLKDQNLALRWVQRNIRFFGGDPQRVTIFGQSAGGVAA 224
            :|::.|||.|..:...|  |.:.:..:.|:.:.|....|         ||.||.:.|.||||   
  Rat   142 IVSIEYRLVPQVYFPEQIHDVIRATKYFLQPEVLDKYKV---------DPGRVGVSGDSAGG--- 194

  Fly   225 HMHLLSPRSHGLFHRVISMSGTANVPFAIAEQPLEQARLLAEFADVPDARNLSTVKLTKALRRIN 289
                             :::......|...|....:.:|.|....|..|.:.:|....:::.   
  Rat   195 -----------------NLAAALGQQFTYVESLKNKLKLQALIYPVLQALDFNTPSYQQSMN--- 239

  Fly   290 ATKLLNAGDGLKYWDVDHMTNFRPVVE-------EGLEVD--AFLNAHPMDMLAQGMPTSIPL-- 343
             |.:|.....::|| ||:.......||       ..|:|:  |.|.|. :|..:. :|:||..  
  Rat   240 -TPILPRHVMVRYW-VDYFKGNYDFVEAMIVNNHTSLDVERAAALRAR-LDWTSL-LPSSIKKNY 300

  Fly   344 --LLGTVPGEGAVRVV 357
              :|.|:   |..|:|
  Rat   301 KPVLQTI---GDARIV 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_523758.3 alpha/beta hydrolases 38..527 CDD:473884 64/276 (23%)
Nceh1NP_001120996.1 Abhydrolase_3 109..381 CDD:400284 58/249 (23%)
Involved in the stabilization of the negatively charged intermediate by the formation of the oxyanion hole. /evidence=ECO:0000250|UniProtKB:Q5NUF3 113..115 1/1 (100%)

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