DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and RAC6

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_195320.1 Gene:RAC6 / 829750 AraportID:AT4G35950 Length:197 Species:Arabidopsis thaliana


Alignment Length:199 Identity:96/199 - (48%)
Similarity:127/199 - (63%) Gaps:22/199 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|.|||||.|||||||.::.:.||..||||||:|:.|::.|:|..|.|.||||||||||:||||
plant     8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRP 72

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND-------PNTIR 129
            |||...||.::.||:.|..|.||:.:||.||:||:.|.|||:|||.|.|||:|       |..: 
plant    73 LSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAV- 136

  Fly   130 DLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTR------ 188
                    |:...:|..:.:.|.|.||:|||:||:|.|:.||:.|.|..||..|:||.:      
plant   137 --------PITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQPPKQKKKKNKAQKA 193

  Fly   189 CLLL 192
            |.:|
plant   194 CSIL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 89/178 (50%)
RAC6NP_195320.1 Rop_like 6..178 CDD:206705 89/178 (50%)

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