DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhoc

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001016569.1 Gene:rhoc / 549323 XenbaseID:XB-GENE-941426 Length:193 Species:Xenopus tropicalis


Alignment Length:193 Identity:169/193 - (87%)
Similarity:181/193 - (93%) Gaps:1/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65
            |..|||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
 Frog     1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQED 65

  Fly    66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRD 130
            ||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||.:|.|:
 Frog    66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRE 130

  Fly   131 LAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKK-RKKTRCLLL 192
            |.|||||||||::||.||.:||||.|||||||:|:|||:|||.||||||||:| |||.||.:|
 Frog   131 LTKMKQEPVKPEDGREMANRINAFGYLECSAKTKDGVREVFEMATRAALQVRKHRKKQRCSIL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 156/173 (90%)
rhocNP_001016569.1 RhoA_like 5..179 CDD:206662 156/173 (90%)

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