DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhocb

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001002445.1 Gene:rhocb / 436718 ZFINID:ZDB-GENE-040718-144 Length:193 Species:Danio rerio


Alignment Length:193 Identity:170/193 - (88%)
Similarity:181/193 - (93%) Gaps:1/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65
            |..|||||||||||||||||||||||||||||||||||||||:||||||.|||||||||||||||
Zfish     1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDSKQVELALWDTAGQED 65

  Fly    66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.:|.|:
Zfish    66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRE 130

  Fly   131 LAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKK-TRCLLL 192
            |.|||||||||:|||.||.:|:||.|||||||:|:|||:|||.||||||||:|||| :.||||
Zfish   131 LIKMKQEPVKPEEGRDMANRISAFGYLECSAKTKDGVREVFEMATRAALQVRKRKKRSGCLLL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 156/173 (90%)
rhocbNP_001002445.1 RhoA_like 5..179 CDD:206662 156/173 (90%)

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