DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and rhogb

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956334.1 Gene:rhogb / 336933 ZFINID:ZDB-GENE-030131-8877 Length:191 Species:Danio rerio


Alignment Length:187 Identity:102/187 - (54%)
Similarity:134/187 - (71%) Gaps:1/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.|||||||.::...||:.|:||||:||.:.:.||.:.|.|.||||||||:|||||.
Zfish     5 KCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVSVDNRTVSLNLWDTAGQEEYDRLRT 69

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            ||||.|:|.::|||:.||.|.|||..||.|||.|.||:|||:|||.|.|||||.:.::.|.:..|
Zfish    70 LSYPQTNVFIICFSISSPPSYENIKHKWHPEVTHHCPSVPILLVGTKSDLRNDADVLKKLKEQNQ 134

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKK-RKKTRCLLL 192
            .|:..|:|:|:|.:|:|..|.||||.|::|::|||..|.||.|..:. ..|..|:||
Zfish   135 APITTQQGQALARQIHAVKYRECSALSQDGIKDVFADAVRAYLSPQPVANKKPCILL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 97/171 (57%)
rhogbNP_956334.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..191 CDD:476819 100/185 (54%)

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