DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and Rhoh

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001013448.1 Gene:Rhoh / 305341 RGDID:1307623 Length:191 Species:Rattus norvegicus


Alignment Length:184 Identity:77/184 - (41%)
Similarity:109/184 - (59%) Gaps:7/184 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||.|.|||.||:.|:.:.|||.|.|||:||...|:.:||.|:.|.||||||.:.:..:||
  Rat     6 KCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRP 70

  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136
            |||...||:|||:||.:..|..|:..||..||:...|..|:::|..:.|.       |::...:.
  Rat    71 LSYQQADVVLMCYSVANHSSFLNLKNKWISEVRSNLPCTPVLVVATQTDQ-------REMGPHRA 128

  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKTRCL 190
            ..:...||:.:|:.:.|..||||||.|..||:.|||.|.|.|:...:|:..|.|
  Rat   129 SCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRKL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 73/171 (43%)
RhohNP_001013448.1 Rho 5..169 CDD:206641 72/169 (43%)

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