DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rho1 and Rhof

DIOPT Version :10

Sequence 1:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_780301.1 Gene:Rhof / 23912 MGIID:1345629 Length:211 Species:Mus musculus


Alignment Length:198 Identity:98/198 - (49%)
Similarity:131/198 - (66%) Gaps:7/198 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TTIRK--KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64
            ::.||  |:||||||.||||.||:|:.:..|||.|.|:|||.|.|.:.|..|:|.|.|:||||||
Mouse    14 SSARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQE 78

  Fly    65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIR 129
            ||||||||||.:|.::|:|:.|.:|.|.:|:..||.|||.|||..:|.:|:|.|.|||.|...:|
Mouse    79 DYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLR 143

  Fly   130 DLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL----QVKKRKKTR-C 189
            .|...:.||:...:|....|::....|||||||.:|.|.|||..|.:.||    :.:::||.| |
Mouse   144 KLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVALSALKKAQRQKKHRIC 208

  Fly   190 LLL 192
            |||
Mouse   209 LLL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 89/175 (51%)
RhofNP_780301.1 Rho4_like 17..211 CDD:206704 96/193 (50%)
Effector region. /evidence=ECO:0000255 48..56 5/7 (71%)

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