DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and AIR12

DIOPT Version :10

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_566306.3 Gene:AIR12 / 819927 AraportID:AT3G07390 Length:273 Species:Arabidopsis thaliana


Alignment Length:153 Identity:37/153 - (24%)
Similarity:58/153 - (37%) Gaps:43/153 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LAVAIWPDPGQS---------LPQGAPETVCDTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQ 74
            |:||....|.|:         .|.|.........|.:.|||...|  .|..::: :|.|:|.:|:
plant    85 LSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAP--VVKTYNI-SSYSSLVEGK 146

  Fly    75 ------TLRVD-LTG----------VPAGL-------SFGGYMIQARNRNPPHQIIGQFGPARDG 115
                  .||.: |:|          ||||.       ..||.:...|....|      |||...|
plant   147 LAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHP------FGPDNLG 205

  Fly   116 TIKLMN-CENSVNNSATHSNAGP 137
            :.:::: .|::...||....:.|
plant   206 SHRVLSFTEDAAPGSAPSPGSAP 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:460411 30/123 (24%)
DOMON_SDR_2_like 223..392 CDD:187686
Cyt_b561_FRRS1_like 358..553 CDD:176490
AIR12NP_566306.3 DOMON_CIL1_like 61..213 CDD:187687 33/136 (24%)
Blue background indicates that the domain is not in the aligned region.

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