DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8388 and CG9932

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_609599.1 Gene:CG9932 / 34701 FlyBaseID:FBgn0262160 Length:2171 Species:Drosophila melanogaster


Alignment Length:623 Identity:113/623 - (18%)
Similarity:197/623 - (31%) Gaps:229/623 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 ASALEEHI--------VKSEHDDSVAAAV-----KRRRGRPRKVAQQDAREELKSVLEQINLNEI 141
            :|.||.|:        ::.:...:...||     ::::.:|::|. .||:||        .|.:.
  Fly    57 SSLLERHVERFRLQQLLQQQRQAAAVVAVVNSVQQQQQQQPQQVG-MDAKEE--------GLPQC 112

  Fly   142 KI-------------EFPEADLTIADVLEDQEEQDFLPDDC-----ISKEGAEDPEVLEKKPPTL 188
            ||             :.|...||   .|.|...:..:.:.|     .|:.       .:|....:
  Fly   113 KIKRNYSCNHCAYFTQNPRYHLT---HLRDVHGEKIVINKCKLCLYASRH-------FQKLVRHM 167

  Fly   189 K----------------RKVSGRSRGRRRVQLAER-------------PNTSCLPKIQKSQEFND 224
            |                |...|.||..|:.:|.|.             |:...|.::::     :
  Fly   168 KMVHGCTDGIPSGHGQARGKRGMSREARKRRLEESVGVMGGQSLTVTVPDVPTLEQVKR-----E 227

  Fly   225 YIREHYKVQCHICNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKR-GVLVDHLRRH------- 281
            .:.:..|:|..|     :.|::.....::..:||...:.....:.:: .||.|:.|:.       
  Fly   228 LLLQEEKLQRDI-----QAFNQRQREEQQREQQRELELVATSAYERQMQVLRDYERQSPAEPPTP 287

  Fly   282 -------------QDPET--FKCSICGRVMGHRRSLELHMRMHEIKSRG--RLYRCEQCSKAFYS 329
                         ::|:.  .|||.|.....:|..|    |.||:...|  :.:||::||...:.
  Fly   288 SPTSGSATPPSNGEEPQNRLLKCSACEFTTLYRTQL----RAHELAEHGKTKFFRCDKCSYVTHI 348

  Fly   330 AVVYERHKLTH-IPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALA 393
            ...:.:|...| :|    .:.|..|:...|.::.                             |.
  Fly   349 KARFSKHVKYHSMP----MIKCVTCDFRTPYKWN-----------------------------LD 380

  Fly   394 RHMEEHTGGPQAAIKCHLCDSMLTTKYGLA-----RHIKMMHTAENLQPMQ---------CEFCL 444
            |||:.|.|.  .|.||..||.....|..|.     .|:..:..|.::.|.:         ||..|
  Fly   381 RHMKNHGGA--GAFKCAACDFTADIKQSLTVHEMNHHVPPVGNAGSIWPRRQNKVGASEMCEDFL 443

  Fly   445 KICPSLQ-----------------------------AHQHHI----KYTHNTARSHQCPMCEKAF 476
            .....|:                             .|.||.    ||...              
  Fly   444 SDSAELEDQYNNNNVDDELDGVDDADEAMSGGEEQPLHLHHYGKRSKYDDE-------------- 494

  Fly   477 KRPNEL--KEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSRKSDTI 539
            :.|.:|  |...::.|..|....|...:|..:...:....|.|      .|..|..|.||.|.|.
  Fly   495 EEPTDLSQKGGCSSDTSSVGTPTPRAQRTMPNLIPISKGAKDV------LNLSKETNASRSSLTE 553

  Fly   540 IA------VSVRKTTETRQDGGLVPAEAIATTSSPRAE 571
            ||      ..:.:..:......|.||..:|:.:|.|::
  Fly   554 IASMFFNEKQISEMLDKSDVPQLSPATTVASQNSTRSQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368 4/17 (24%)
C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
C2H2 Zn finger 320..340 CDD:275368 4/19 (21%)
C2H2 Zn finger 350..369 CDD:275368 3/18 (17%)
C2H2 Zn finger 440..461 CDD:275368 9/53 (17%)
C2H2 Zn finger 469..489 CDD:275368 3/21 (14%)
C2H2 Zn finger 497..515 CDD:275368 2/17 (12%)
CG9932NP_609599.1 C2H2 Zn finger 339..359 CDD:275368 4/19 (21%)
C2H2 Zn finger 366..386 CDD:275368 7/48 (15%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 816..836 CDD:275370
C2H2 Zn finger 844..862 CDD:275370
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.