DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and Zfp93

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001100016.1 Gene:Zfp93 / 296399 RGDID:1309760 Length:427 Species:Rattus norvegicus


Alignment Length:525 Identity:110/525 - (20%)
Similarity:176/525 - (33%) Gaps:171/525 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KRRRGRPRKVAQQDAREELKSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDF-LPDDCISKEG 174
            :|::.:|:.:..|:.:.|         .||.....|......|..||:..::.. ||        
  Rat     3 RRKQAKPQHLRSQEPQPE---------RNEPGGVAPRTAGEPASALENAAQKPAGLP-------- 50

  Fly   175 AEDPEVLEKKP-----PTLKRKVSGRSRGRRRVQLAERPNTSCLP-----KIQKSQEFNDYIREH 229
            |||.:.  ::|     ||.:.|       .|...|.||....|.|     .:...::.:.::|.|
  Rat    51 AEDSDA--QQPAAVALPTSEAK-------ERTATLGERTFNCCYPGCHFKTVHGMKDLDRHLRIH 106

  Fly   230 YKVQCHICNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKRGVLVDHLRRHQDPETFKCSICGR 294
            ...:.|.|..                        |::.|.::..|..|:|.|...:..||.:|..
  Rat   107 TGDKPHKCEF------------------------CDKCFSRKDNLTMHMRCHTSVKPHKCHLCDY 147

  Fly   295 VMGHRRSLELHMRMHEIKSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPS 359
            ......||:.|:|:|   |..|.|:|:.|..|..::                            |
  Rat   148 AAVDSSSLKKHLRIH---SDERPYKCQMCPYASRNS----------------------------S 181

  Fly   360 QYTMQQHVKLVHLNLYAK----ICDVCGKSIRGREALARHMEEHTGGPQAAIKCHLCDSMLTTKY 420
            |.|       |||..:..    .|.:|....:....|.|||..|:|  :...||..||...|.|.
  Rat   182 QLT-------VHLRSHTGDTPFQCWLCSAKFKISSDLKRHMIVHSG--EKPFKCEFCDVRCTMKA 237

  Fly   421 GLARHIKMMHTAENL----------------------QPMQCEFCLKICPSLQAHQHHIKYTHNT 463
            .|..||::.||.:.|                      .|.:|..|...|.|..|.:.|.: .|..
  Rat   238 NLKSHIRIKHTFKCLHCAFQGRDRADLLEHSRLHQADHPEKCPECSYSCSSPAALRVHSR-VHCK 301

  Fly   464 ARSHQCPMCEKAFKRPNELKE-----------------------------HMTTHTGEVLYTCPH 499
            .|..:|..|....|||:.|.:                             |:|....:..:.|..
  Rat   302 DRPFKCDFCSFDTKRPSSLAKHIDKVHRERAKTENRAPQGKDGPRESGPHHVTNIVTQKAFRCDK 366

  Fly   500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSRKSDTIIAVSV-RKTTETRQDGGLVPAEAIA 563
            |..:|..:.::..|:|:  ..:|.||::..|           ||. .:...:.|.|.||..|.:.
  Rat   367 CGASFARDDSLRCHQKQ--HSDWGENKNSNL-----------VSFPLEGIASGQLGPLVSVEQLE 418

  Fly   564 TTSSP 568
            :|..|
  Rat   419 STLEP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368 5/16 (31%)
C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
C2H2 Zn finger 320..340 CDD:275368 3/19 (16%)
C2H2 Zn finger 350..369 CDD:275368 3/18 (17%)
C2H2 Zn finger 440..461 CDD:275368 6/20 (30%)
C2H2 Zn finger 469..489 CDD:275368 8/48 (17%)
C2H2 Zn finger 497..515 CDD:275368 4/17 (24%)
Zfp93NP_001100016.1 COG5048 <96..227 CDD:227381 39/194 (20%)
zf-H2C2_2 98..123 CDD:463886 6/48 (13%)
C2H2 Zn finger 114..134 CDD:275368 6/43 (14%)
C2H2 Zn finger 142..162 CDD:275368 6/19 (32%)
C2H2 Zn finger 170..190 CDD:275368 9/54 (17%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
C2H2 Zn finger 226..245 CDD:275368 8/18 (44%)
C2H2 Zn finger 279..299 CDD:275368 6/20 (30%)
C2H2 Zn finger 307..328 CDD:275368 6/20 (30%)
C2H2 Zn finger 364..384 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.

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