DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8204 and AT4G28820

DIOPT Version :10

Sequence 1:NP_611050.1 Gene:CG8204 / 36728 FlyBaseID:FBgn0034033 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_001329310.1 Gene:AT4G28820 / 829003 AraportID:AT4G28820 Length:181 Species:Arabidopsis thaliana


Alignment Length:169 Identity:48/169 - (28%)
Similarity:66/169 - (39%) Gaps:37/169 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKCIICVDNLRKYKCSKCSAPYCSVACYKTHRDSPQCATRESDLKKTEVGYQEEPTLHVPF--PT 64
            :.|.||...:.||||..|..||||:.|:|.|:::| || :.||...||......|...||.  |.
plant     7 QTCEICEKVVSKYKCPSCLVPYCSLGCFKIHKETP-CA-KPSDPSSTEEKPAASPAKEVPVKRPE 69

  Fly    65 DDTVAAEKLQQ-------------------------LENCQ--------ELRNLLHNPHLRSLLQ 96
            :.....||.||                         ||..|        |:|..|.:..|:.|:.
plant    70 EANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALKDEPLQKLIY 134

  Fly    97 QIDVAINAQSAMMAAMQEPLFVEFANACLQVVEPMTDAE 135
            .||.:.|....:..||....|.||.:..|..:....|.:
plant   135 SIDSSSNPLQELDEAMGIEAFREFTDKILSNISKSNDEQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8204NP_611050.1 zf-HIT_ZNHIT2-3 3..35 CDD:467796 15/31 (48%)
AT4G28820NP_001329310.1 zf-HIT_ZNHIT2-3 7..40 CDD:467796 15/32 (47%)
alt <34..>176 CDD:222881 35/142 (25%)

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