DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8204 and znhit3

DIOPT Version :10

Sequence 1:NP_611050.1 Gene:CG8204 / 36728 FlyBaseID:FBgn0034033 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_956567.1 Gene:znhit3 / 393243 ZFINID:ZDB-GENE-040426-1114 Length:151 Species:Danio rerio


Alignment Length:151 Identity:63/151 - (41%)
Similarity:87/151 - (57%) Gaps:9/151 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKCIICVDNLRKYKCSKCSAPYCSVACYKTHRDSPQC-ATRESD---LKKTEVGYQEEP-TLHV 60
            |:.|.:|.:.:.||:|..|...||||:|:|.|::...| ..:|||   .|...|...||| |:..
Zfish     1 MQLCGVCSELVPKYRCPACRIRYCSVSCFKRHKEDDSCDPVKESDPASSKPAAVSNAEEPWTVED 65

  Fly    61 PFPTD---DTVAAEKLQQLENCQELRNLLHNPHLRSLLQQIDVAINAQSAMMAAMQEPLFVEFAN 122
            ....|   |.|..::||||.:.:.|:.||.|||||.|:..:|.|.|...||..|||||||||||:
Zfish    66 LLDEDSQTDKVPLQRLQQLGDSEALKGLLRNPHLRQLMMSVDSAENKAKAMKDAMQEPLFVEFAD 130

  Fly   123 ACLQVVEPM-TDAERTEFELY 142
            .||:::||. ||....:.:.|
Zfish   131 QCLKIIEPSETDNNEDDDDEY 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8204NP_611050.1 zf-HIT_ZNHIT2-3 3..35 CDD:467796 13/31 (42%)
znhit3NP_956567.1 zf-HIT_ZNHIT2-3 2..35 CDD:467796 13/32 (41%)

Return to query results.
Submit another query.