DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8204 and hit1

DIOPT Version :10

Sequence 1:NP_611050.1 Gene:CG8204 / 36728 FlyBaseID:FBgn0034033 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_594762.1 Gene:hit1 / 2543613 PomBaseID:SPAC4F10.19C Length:154 Species:Schizosaccharomyces pombe


Alignment Length:126 Identity:37/126 - (29%)
Similarity:63/126 - (50%) Gaps:29/126 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKCIICVDNLRKYKCSKCSAPYCSVACYKTHRDSPQCATRESDLKKTEVGYQE-----EPTLHV 60
            |..|.||.::..||||.|||.||||:.|:|.|:.  ||.|...:...|..|.:|     ||:.:|
pombe     1 MTTCSICNESEIKYKCPKCSFPYCSLPCWKIHQS--QCETVNDNNTTTFKGVKEPLNPPEPSPNV 63

  Fly    61 -------PFPTDDTVAAEKLQQLENCQELRNLLHNPHLRSLLQQIDVAINAQSAMMAAMQE 114
                   |...::.:.:|.|        |.:::.:|.:::|::.     ||:  ::..|:|
pombe    64 IYVNGRIPSLAEEALPSESL--------LESIVEDPSIKNLIES-----NAE--LLHIMKE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8204NP_611050.1 zf-HIT_ZNHIT2-3 3..35 CDD:467796 17/31 (55%)
hit1NP_594762.1 zf-HIT_ZNHIT2-3 3..37 CDD:467796 18/35 (51%)

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