DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and CKA1

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_012229.1 Gene:CKA1 / 854776 SGDID:S000001297 Length:372 Species:Saccharomyces cerevisiae


Alignment Length:336 Identity:96/336 - (28%)
Similarity:165/336 - (49%) Gaps:65/336 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDKMEKIGEGTYGTVFKGRNRDTMEIVALK--------------RVRLDEDDEGVPSSAL----- 49
            |:...|:|.|.|..||:|...|:...:.:|              ::..|..:|.||.:.|     
Yeast    40 YEIENKVGRGKYSEVFQGVKLDSKVKIVIKMLKPVKKKKIKREIKILTDLSNEKVPPTTLPFQKD 104

  Fly    50 -----REICLLKELK----------HKNIVRLIDVLHS--DKKLTLVFEHCDQ-DLKKYFDSLNG 96
                 ::..:||.::          |.||:.|.|::..  .|...||||:.|. |.:..:..|. 
Yeast   105 QYYTNQKEDVLKFIRPYIFDQPHNGHANIIHLFDIIKDPISKTPALVFEYVDNVDFRILYPKLT- 168

  Fly    97 EIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLI-NKNGELKLADFGLARAFGIPVKCYSA 160
              |:.: |.:|.:||:.|.:|||..::|||:||.|::| :||.:|:|.|:|||..:.:.:: |:.
Yeast   169 --DLEI-RFYMFELLKALDYCHSMGIMHRDVKPHNVMIDHKNKKLRLIDWGLAEFYHVNME-YNV 229

  Fly   161 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPN-- 223
            .|.:.:::.|::|...::|..|:|:||.|.:||.:.....|.|.|:...|||:||.:||||.:  
Yeast   230 RVASRFFKGPELLVDYRMYDYSLDLWSFGTMLASMIFKREPFFHGTSNTDQLVKIVKVLGTSDFE 294

  Fly   224 ------EDSWPGVSH-LSDYVALPSFPAITSWSQLVPRLNS--KGR----DLLQKLLICRPNQRI 275
                  |.:.|...: :..|:..|       |.:.:...|.  .|.    ||:..||.....:|:
Yeast   295 KYLLKYEITLPREFYDMDQYIRKP-------WHRFINDGNKHLSGNDEIIDLIDNLLRYDHQERL 352

  Fly   276 SAEAAMQHPYF 286
            :|:.||.||:|
Yeast   353 TAKEAMGHPWF 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 95/334 (28%)
CKA1NP_012229.1 STKc_CK2_alpha 21..363 CDD:271034 95/334 (28%)

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