DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and KDX1

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_012761.1 Gene:KDX1 / 853696 SGDID:S000001644 Length:433 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:102/301 - (33%)
Similarity:168/301 - (55%) Gaps:31/301 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIGEGTYGTV----FKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELK-HKNIVRLID 68
            |||.|::..:    :...|.:|.  ||::::.....::......|||:.||:.|: |.|||.|.|
Yeast    28 KIGRGSHSLICSSTYTESNEETH--VAIRKIPNAFGNKLSCKRTLRELKLLRHLRGHPNIVWLFD 90

  Fly    69 ---VLHSDKKLTLVF---EHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDL 127
               |.:.:..|..|:   |..:.||.:...| ...::.|..:||:.|:|..|.:.||.||||.||
Yeast    91 TDIVFYPNGALNGVYLYEELMECDLSQIIRS-EQRLEDAHFQSFIYQILCALKYIHSANVLHCDL 154

  Fly   128 KPQNLLINKNGELKLADFGLARAF--------GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSID 184
            ||:|||:|.:.:||:.:|||:.::        |. :|.|   :.::||:.|::|...:..|.::|
Yeast   155 KPKNLLVNSDCQLKICNFGLSCSYSENHKVNDGF-IKGY---ITSIWYKAPEILLNYQECTKAVD 215

  Fly   185 MWSAGCILAELADAGR-PLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAI--T 246
            :||.|||||||  .|| |:|.|.|.:|.|..|.::||||.|::...::....|..:..|..|  .
Yeast   216 IWSTGCILAEL--LGRKPMFEGKDYVDHLNHILQILGTPPEETLQEIASQKVYNYIFQFGNIPGR 278

  Fly   247 SWSQLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPYFT 287
            |:..::|..|.:..:||:|:|...|.:||:.|.|::|||.:
Yeast   279 SFESILPGANPEALELLKKMLEFDPKKRITVEDALEHPYLS 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 101/298 (34%)
KDX1NP_012761.1 STKc_MPK1 22..355 CDD:173750 102/301 (34%)

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