DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and AT1G57700

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_176083.2 Gene:AT1G57700 / 842146 AraportID:AT1G57700 Length:692 Species:Arabidopsis thaliana


Alignment Length:290 Identity:113/290 - (38%)
Similarity:175/290 - (60%) Gaps:10/290 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRL-DEDDEGVPSSALREICLLKELKHKNIVRL- 66
            ::|:|.||:|||.:|::.|:.:|.:|||||:||. :.|.|.|...| |||.:|:.|.|.|:::| 
plant   146 FEKLEMIGQGTYSSVYRARDLETNQIVALKKVRFANMDPESVRFMA-REIIILRRLNHPNVMKLE 209

  Fly    67 -IDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
             :.:..:...:.|:||:.|.||.....:...:...|..:.:|.|||.||..|||..|||||:|..
plant   210 GLIISKASGSMYLIFEYMDHDLAGLASTPGIKFSQAQIKCYMKQLLLGLEHCHSCGVLHRDIKCS 274

  Fly   131 NLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAE 194
            |||:::|..||:.||||:..: |...:..::.|||||||||::|.|:..|..::|:||.||||||
plant   275 NLLLDRNNNLKIGDFGLSNFYRGQRKQPLTSRVVTLWYRPPELLLGSTDYGVTVDLWSTGCILAE 339

  Fly   195 LADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSW--PGVSHLSDYVALPSFPAITSWSQLVPRLNS 257
            |. .|:||.||...::|:.|||::.|:|:|:.|  ..:.|.:  :..|..|.....:.....|.|
plant   340 LF-TGKPLLPGRTEVEQMHKIFKLCGSPSEEYWRRSRLRHAT--IFKPQHPYKRCVADTFKDLPS 401

  Fly   258 KGRDLLQKLLICRPNQRISAEAAMQHPYFT 287
            ....||:.||...|:.|.:|.:|:|..:||
plant   402 SALALLEVLLAVEPDARGTASSALQSEFFT 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 111/287 (39%)
AT1G57700NP_176083.2 Protein Kinases, catalytic domain 146..430 CDD:473864 111/287 (39%)

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