DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and CAK1AT

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_194627.1 Gene:CAK1AT / 829019 AraportID:AT4G28980 Length:479 Species:Arabidopsis thaliana


Alignment Length:415 Identity:109/415 - (26%)
Similarity:160/415 - (38%) Gaps:143/415 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELK-HKNIVRL 66
            ||:..|::|.|.|..|::.|......|||||.: .|.      .||.|||..|..|. ..|:|  
plant    20 KYEIFERVGSGAYADVYRARRLSDGLIVALKEI-FDY------QSAFREIDALTILNGSPNVV-- 75

  Fly    67 IDVLH-----SDKKLTLVFEHCDQDL---------KKYFDSLNGEIDMAVCRSFMLQLLRGLAFC 117
              |:|     .::...||.|....||         ||..:..:| ..:...:.:|:|:|.|:..|
plant    76 --VMHEYFWREEENAVLVLEFLRSDLAAVIRDGKRKKKVEGGDG-FSVGEIKRWMIQILTGVDAC 137

  Fly   118 HSHNVLHRDLKPQNLLINKNGELKLADFGLARAF-----------------------------GI 153
            |.:.::||||||.|:||:.:|.|||||||.||..                             .|
plant   138 HRNLIVHRDLKPGNMLISDDGVLKLADFGQARILMEHDIVASDENQQAYKLEDKDGETSEPPEVI 202

  Fly   154 P--------------------------------------------------VKC----------- 157
            |                                                  :.|           
plant   203 PDYENSPRQGSDGQEREAMSKDEYFRQVEELKAKQVVRDDTDKDSNVHDGDISCLATCTVSEMDD 267

  Fly   158 --------YSAE-------------VVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRP 201
                    |.|:             |.|.|:|||::|:|:.:|...:|:||.||:.|||... .|
plant   268 DLGRNSFSYDADEAVDDTQGLMTSCVGTRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSL-EP 331

  Fly   202 LFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITS---WSQLVPRLNSKGRDLL 263
            ||||...:||:.::..|||..||:.|||...|.||.:: ||..:.|   ....:|..:.....||
plant   332 LFPGISDIDQISRVTNVLGNLNEEVWPGCVDLPDYKSI-SFAKVESPLGIEGCLPNHSGDVISLL 395

  Fly   264 QKLLICRPNQRISAEAAMQHPYFTD 288
            :||:...|..|.:....:...|.::
plant   396 KKLICYDPASRATTMEMLNDKYLSE 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 108/411 (26%)
CAK1ATNP_194627.1 Protein Kinases, catalytic domain 20..430 CDD:473864 109/415 (26%)
Protein Kinases, catalytic domain <141..>210 CDD:473864 21/68 (31%)

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