DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and CDKL5

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_003150.1 Gene:CDKL5 / 6792 HGNCID:11411 Length:1030 Species:Homo sapiens


Alignment Length:297 Identity:115/297 - (38%)
Similarity:172/297 - (57%) Gaps:20/297 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            |.|::.:..:|||.||.|.|.|:::|.||||:|:.:..|::|.|..:.|||:.:|:.||.:|||.
Human    10 MNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVE 74

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.:......||.||||:.::::.:..:.:...:.....:|::.||::.:.:||.::::|||:||:
Human    75 LKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPE 139

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKC-YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAE 194
            ||||:.|..|||.|||.||........ |:..|.|.|||.|::|.||. |..|:||||.||||.|
Human   140 NLLISHNDVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAP-YGKSVDMWSVGCILGE 203

  Fly   195 LADAGRPLFPGSDVLDQLMKIFRVLG-TPNEDSWPGVSHLSDYVALP-----SFPAITSWSQLVP 253
            |:| |:|||||...:|||..|.:||| .|:|       .:..:.:.|     .|||:.....|..
Human   204 LSD-GQPLFPGESEIDQLFTIQKVLGPLPSE-------QMKLFYSNPRFHGLRFPAVNHPQSLER 260

  Fly   254 R----LNSKGRDLLQKLLICRPNQRISAEAAMQHPYF 286
            |    |||...||::.||...|..|...|..:.||.|
Human   261 RYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTF 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 113/293 (39%)
CDKL5NP_003150.1 STKc_CDKL5 11..297 CDD:270838 113/294 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..349
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..566
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..834
Blue background indicates that the domain is not in the aligned region.

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