Protein Alignment Cdk5 and rl

DIOPT Version :10

• Sequence 1: NP_477080.1
• Gene: Cdk5 / 36727
• FlyBaseID: FBgn0013762
• Length: 294
• Species: Drosophila melanogaster
• Sequence 2: NP_001015122.1
• Gene: rl / 3354888
• FlyBaseID: FBgn0003256
• Length: 376
• Species: Drosophila melanogaster
• Alignment Length: 298
• Identity: 117/298 - (39%)
• Similarity: 166/298 - (55%)
• Gaps: 24/298 - (8%)

  Fly     3 KYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLI 67
            :|.|:..||||.||.|....:..|.:.||:|::...| .:......||||.:|...||:||:.:.
  Fly    37 RYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFE-HQTYCQRTLREITILTRFKHENIIDIR 100

  Fly    68 DVLHSD-----KKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDL 127
            |:|..|     :.:.:|....:.||.|...:.....| .:| .|:.|:||||.:.||.|||||||
  Fly   101 DILRVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSND-HIC-YFLYQILRGLKYIHSANVLHRDL 163

  Fly   128 KPQNLLINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 188
            ||.|||:||..:||:.|||||| ...|...::.    .|.|.|||.|:::..:|.||.|||:||.
  Fly   164 KPSNLLLNKTCDLKICDFGLAR-IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 227

  Fly   189 GCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGV------SHLSDYVALPSFPAITS 247
            ||||||:. :.||:|||...||||..|..|||:|:.|....:      ::|......|:.|
  Fly   228 GCILAEML-SNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVP---- 287

  Fly   248 WSQLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPY 285
            |::|.|..::...|||.|:|...|::||..|.|:.|||
  Fly   288 WAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPY 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cdk5	NP_477080.1	STKc_CDK5	3..286	CDD:143344	117/298 (39%)
rl	NP_001015122.1	STKc_ERK1_2_like	32..366	CDD:270839	117/298 (39%)