DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Mapk12

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_006521121.1 Gene:Mapk12 / 29857 MGIID:1353438 Length:390 Species:Mus musculus


Alignment Length:318 Identity:105/318 - (33%)
Similarity:164/318 - (51%) Gaps:45/318 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLID 68
            |..::.:|.|.||.|....:..|...||:|::......|.....|.||:.|||.::|:|::.|:|
Mouse    27 YQDLQPVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 91

  Fly    69 VLHSDKKLT------LVFEHCDQDLKKYF--DSLNGE-IDMAVCRSFMLQLLRGLAFCHSHNVLH 124
            |...|:.|.      ||......||.|..  ::|:.: |...|     .|:|:||.:.|:..|:|
Mouse    92 VFTPDESLDDFTDFYLVMPFMGTDLGKLMKHETLSEDRIQFLV-----YQMLKGLKYIHAAGVIH 151

  Fly   125 RDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 189
            |||||.||.:|::.|||:.||||||.....:..|   |||.|||.|:|:.....||.::|:||.|
Mouse   152 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGY---VVTRWYRAPEVILNWMRYTQTVDIWSVG 213

  Fly   190 CILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDS--------------WPGV---------- 230
            ||:||:. .|:.||.|:|.||||.:|.::.|||..:.              |.|:          
Mouse   214 CIMAEMI-TGKILFKGNDHLDQLKEIMKITGTPPPEFVQKLQSAEVSGSGWWAGLGLGGWPITLF 277

  Fly   231 -SHLSDYV-ALPSFPAITSWSQLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPYF 286
             |...:|: .||.... ..::.::...:.:..:||:::|:....||::|..|:.||||
Mouse   278 PSQAKNYMEGLPELEK-KDFASVLTNASPQAVNLLERMLVLDAEQRVTAAEALTHPYF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 103/316 (33%)
Mapk12XP_006521121.1 STKc_p38gamma 11..376 CDD:143385 105/318 (33%)

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