DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Cdk18

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_063128137.1 Gene:Cdk18 / 289019 RGDID:1309523 Length:474 Species:Rattus norvegicus


Alignment Length:296 Identity:167/296 - (56%)
Similarity:214/296 - (72%) Gaps:5/296 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ::.|.|::|:|||||.||||||::.|..:||||.:|| |.:||.|.:|:||:.|||:|||.|||.
  Rat   141 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHANIVT 204

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.|::|:|:.||||||:.|.|||:|.|.....::|...:.||.|||||||:||...:||||||||
  Rat   205 LHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMNMHNVKIFMFQLLRGLAYCHRRKILHRDLKPQ 269

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||:.|||||||||||||..:|.|.||.|||||||||||||.|:..|:|.||||..||||.|:
  Rat   270 NLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 334

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQL--VPRLNSK 258
            | .|:||||||.|.::|..|||:||||.|:|||||:.:|::.|. :||.......|  .|||:::
  Rat   335 A-TGKPLFPGSTVKEELHLIFRLLGTPTEESWPGVTSISEFRAY-NFPRYLPQPLLSHAPRLDTE 397

  Fly   259 GRDLLQKLLICRPNQRISAEAAMQHPYFTDSSSSGH 294
            |.:||..||:.....|:|||||:.||||.......|
  Rat   398 GINLLTSLLLYESKSRMSAEAALSHPYFQSLGERVH 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 164/284 (58%)
Cdk18XP_063128137.1 None

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