DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Y38E10A.8

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_496691.3 Gene:Y38E10A.8 / 189655 WormBaseID:WBGene00012586 Length:289 Species:Caenorhabditis elegans


Alignment Length:323 Identity:82/323 - (25%)
Similarity:137/323 - (42%) Gaps:92/323 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKEL-KHKNIVRL 66
            :||.::.:|:|::|.||:.:.::..|:.|:|  |||.|...:|.:| ||:..:..: :|...:..
 Worm    17 RYDVVDVLGQGSFGIVFQAQRKNDRELRAVK--RLDLDSATLPRAA-REVTTITSIGRHSGYIFF 78

  Fly    67 IDVLHSDKK------LTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFML------QLLRGLAFCHS 119
            .:|...:.|      :.:..|.|:|:..|  |.:.|. ..|..|.:||      ||...|...||
 Worm    79 DEVFWKEHKTGSAGHMYICMELCEQNTLK--DWIKGN-RTARSRPWMLMKDWIKQLACALDHLHS 140

  Fly   120 HNVLHRDLKPQNLLINKNGE---LKLADFGL-ARAF-GI-----------PVKCYSAEVVTLWYR 168
            :|.:||||||:|:...::.:   ||:.|||| .||. |:           ..:.::|...|..|.
 Worm   141 NNFIHRDLKPENVFFARDSQFKKLKIGDFGLTTRAIEGLKDWKQRTQSQEAGQNHTAGAGTPSYM 205

  Fly   169 PPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNED-------- 225
            .|:.:  ...|...:|:::.|.|.|||.                     ::.||:::        
 Worm   206 APEQI--RNQYNEKVDIFALGLIAAELI---------------------IINTPSDEMGTNDIIR 247

  Fly   226 --SWPGVSHLSDYVALPSFP-AITSWSQLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPY 285
              .||        :|...:| ||...|||. .:|              |..|.||.....||:
 Worm   248 SGQWP--------IAWQDYPDAIEFLSQLT-HMN--------------PTMRPSAVEVSMHPF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 82/323 (25%)
Y38E10A.8NP_496691.3 Protein Kinases, catalytic domain 14..285 CDD:473864 80/319 (25%)

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