DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and cdk-4

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_510256.1 Gene:cdk-4 / 181472 WormBaseID:WBGene00000406 Length:342 Species:Caenorhabditis elegans


Alignment Length:238 Identity:54/238 - (22%)
Similarity:87/238 - (36%) Gaps:75/238 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 KDVLLVLKYVSNK--DVFM-------------RYHKAHLTRRLIL----DSS------------- 523
            ::.:||.::|.||  |.|:             ||.....|.|.||    ||.             
 Worm   388 EEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNI 452

  Fly   524 -ADSEKEEDMVEWLREVGMPADYVNKLARMFQDIKVSEDLNTQFRSQTTR----HDAINIKILNA 583
             .|:|.|..:.::    ||        ||:|:        ..|.|:.|.|    |..|:.:.|..
 Worm   453 LLDAEMEPKVADF----GM--------ARIFR--------VDQSRADTRRVVGTHGYISPEYLMH 497

  Fly   584 GAWARGSERVSVS-LPLELEDYIPEVEEFYKKKHSGRKLQWY--HHMSNGTITFANNTGRFDLDV 645
            |.::..|:..|.. |.||:... .....|::...||:.|..|  .|..||:          .|::
 Worm   498 GQFSVKSDVYSFGVLVLEIISG-KRNSNFHETDESGKNLVTYAWRHWRNGS----------PLEL 551

  Fly   646 TTFQMAVLFAWNQRPNEKVSYENLRLATELPDPELRRTLWSLV 688
            ...::..    |.:.||.....::.|.....|||.|..|.:::
 Worm   552 VDSELEK----NYQSNEVFRCIHIALLCVQNDPEQRPNLSTII 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344
cdk-4NP_510256.1 Protein Kinases, catalytic domain 38..324 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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