DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Cdk4

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_315841.3 Gene:Cdk4 / 1276486 VectorBaseID:AGAMI1_007178 Length:302 Species:Anopheles gambiae


Alignment Length:298 Identity:123/298 - (41%)
Similarity:180/298 - (60%) Gaps:23/298 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDKMEKIGEGTYGTVFKGRN-RDTMEIVALKRVRLDEDDEGVPSSALREICLLKELK---HKNIV 64
            |:::..||.|.||||::.|: ::...|||||:||:...::|||.|.||||.:||:|.   |.|:|
Mosquito     6 YEELGVIGTGAYGTVYRARDLKNAGTIVALKKVRVALTEDGVPMSTLREIFMLKQLDTFGHPNVV 70

  Fly    65 RLIDVLHSDK-------KLTLVFEHCDQDLKKYFDSLNGE-IDMAVCRSFMLQLLRGLAFCHSHN 121
            :|:||....:       .|.|||||.|.||.:|...|..: :..|..:....::|.|:.|.|||.
Mosquito    71 KLLDVCQGQRLEREGQLVLFLVFEHLDHDLDEYIKRLPPKGMPPATIQRLSREMLTGIDFLHSHR 135

  Fly   122 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMW 186
            ::|||||||||||:.:|.|||||||||:.:...:| .:..|||||||.|:||.| :.|.:|:|:|
Mosquito   136 IIHRDLKPQNLLISSDGHLKLADFGLAKTYDFEMK-LTTVVVTLWYRAPEVLLG-EAYNSSVDIW 198

  Fly   187 SAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWP-GVSHLSDYVALPSFPAITSWS- 249
            |||||:||:... :.||||:...:||.:||.:.|.|:|..|| |:|     :...:|.:..... 
Mosquito   199 SAGCIIAEMFQR-QALFPGTAEGNQLERIFELTGRPSEAQWPRGIS-----IVRENFRSTQRREP 257

  Fly   250 -QLVPRLNSKGRDLLQKLLICRPNQRISAEAAMQHPYF 286
             :..|:|.....|||:.:|....::|.||...:.|.||
Mosquito   258 REFCPKLCDNANDLLKSMLAFSRHERPSARQCLNHAYF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 121/296 (41%)
Cdk4XP_315841.3 STKc_CDK4_6_like 6..295 CDD:270831 121/296 (41%)

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