DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Cdk7

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_312281.3 Gene:Cdk7 / 1273315 VectorBaseID:AGAMI1_011913 Length:343 Species:Anopheles gambiae


Alignment Length:294 Identity:127/294 - (43%)
Similarity:184/294 - (62%) Gaps:11/294 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRL---DEDDEGVPSSALREICLLKELKHKN 62
            :.:|:|::.:|||.:.||:|.|:.:|.||||:|::::   :|..:|:..:|||||.||.||:|:|
Mosquito     7 LNRYEKIDFLGEGQFATVYKARDAETNEIVAVKKIKIGNREEAADGINRTALREIKLLHELQHEN 71

  Fly    63 IVRLIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDL 127
            |:.|:||......::|||:..|.||:.........:..|..:|:|:|.||||.:.|.|.:|||||
Mosquito    72 IIGLLDVFGHKSNVSLVFDFMDTDLEIIIKDPKIILTPANIKSYMIQTLRGLEYLHQHWILHRDL 136

  Fly   128 KPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIL 192
            ||.||||:..|.||:.|||||:.||.|.:..:.:|||.|||.|::||||:.|...:|:|:.||||
Mosquito   137 KPNNLLISGTGVLKIGDFGLAKFFGSPNRINTNQVVTRWYRCPELLFGARQYGIGVDIWAVGCIL 201

  Fly   193 AELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQLVPRLNS 257
            |||. ...|..||...||||.:||:|||||||.:||.|..|.|||....:|.|    .|.....:
Mosquito   202 AELL-LRVPFLPGESDLDQLTRIFQVLGTPNETNWPDVKSLPDYVQYKFYPPI----PLRDIFTA 261

  Fly   258 KGRDLLQ---KLLICRPNQRISAEAAMQHPYFTD 288
            ...||::   |:|...|..|.|...|::..||::
Mosquito   262 ASDDLIELANKMLALYPLHRCSCTEALKMAYFSN 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 125/288 (43%)
Cdk7XP_312281.3 STKc_CDK7 9..306 CDD:270833 127/292 (43%)

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