DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and AT1G63640

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_001322192.1 Gene:AT1G63640 / 842668 AraportID:AT1G63640 Length:1072 Species:Arabidopsis thaliana


Alignment Length:443 Identity:150/443 - (33%)
Similarity:220/443 - (49%) Gaps:75/443 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPF----NRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYSLNPE 66
            |:|..|:|||    |.|:..::    ...|..:.::.||       .||.|.   .|..:..|..
plant   473 IRVYCRIRPFLPGQNSRQTTIE----YIGETGELVVANP-------FKQGKD---THRLFKFNKV 523

  Fly    67 DENFASQETVF-DCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMG----TQESKGIIPRLCDQ 126
            .:..|:||.|| |.  |.::.:...|||.||||||||||||:|||.|    ::|..|:..|..:.
plant   524 FDQAATQEEVFLDT--RPLIRSILDGYNVCIFAYGQTGSGKTYTMSGPSITSKEDWGVNYRALND 586

  Fly   127 LFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNV-MGPYVDGLSQLAVTS 190
            ||....::.. .:||:|.|..:|||||:|.|:|....:.:.|.:....: .|..|...|...|.|
plant   587 LFLLTQSRQN-TVMYEVGVQMVEIYNEQVRDILSDGGSSRRLGIWNTALPNGLAVPDASMHCVRS 650

  Fly   191 YQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVS----RMSLVDL 251
            .:|:..||..|..:|||.||.:|..|||||.|.||        ...||..|..|    .:.||||
plant   651 TEDVLELMNIGLMNRTVGATALNERSSRSHCVLSV--------HVRGVDVETDSILRGSLHLVDL 707

  Fly   252 AGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDN 316
            |||||..::.|.|:||||..:|||||:.||.||..||.:        :..||||:|.||.:|:.:
plant   708 AGSERVDRSEATGERLKEAQHINKSLSALGDVIFALAHK--------NPHVPYRNSKLTQVLQSS 764

  Fly   317 LGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSML 381
            |||.::|:|...::|..|:|.||:|||::|:|... |...........|.:|:|..:|..|:   
plant   765 LGGQAKTLMFVQVNPDGDSYAETVSTLKFAERVSG-VELGAAKSSKEGRDVRQLMEQVSNLK--- 825

  Fly   382 KHATGSPVGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGIS 434
                        |.:|:.           :|:|...::::.....:| |.|:|
plant   826 ------------DVIAKK-----------DEELQNFQKVKGNNATSL-KRGLS 854

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 137/366 (37%)
Kinesin_assoc 356..468 CDD:465047 13/79 (16%)
FHA_KIF13 446..547 CDD:438758
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
AT1G63640NP_001322192.1 CH_SF 41..139 CDD:469584