DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and AT1G18550

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_173290.4 Gene:AT1G18550 / 838436 AraportID:AT1G18550 Length:725 Species:Arabidopsis thaliana


Alignment Length:723 Identity:194/723 - (26%)
Similarity:328/723 - (45%) Gaps:187/723 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIKVAVRVRPFNRREIELDTKCIVEMEKQQ----TILQNPPPLEKIERKQPKTFAFDHCFYSLNP 65
            :|.|.||:||..::|.|..::|.|::..::    |...|.....:::|.:.:.|.||..|    |
plant   151 RILVFVRLRPMGKKERENGSRCCVKVLNKRDVYLTEFTNENDYLRLKRLRVRHFTFDSSF----P 211

  Fly    66 EDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQLFSA 130
            |.   .:|:.|:......:::...:|.|..:|.||.||:||:|||:||.|:.|::......||:.
plant   212 ET---TTQQEVYSTTTGDLVEAVLEGRNGSVFCYGATGAGKTYTMLGTMENPGVMVLAIKDLFAK 273

  Fly   131 IANKSTPELMYKVEVSYMEIYNEKVHDLLDP-KPNKQSLKVREHNVMGPYVDGLSQLAVTSYQDI 194
            :..:|. :..:.|.:||:|:|||.|.|||.| :|    |.:|| :..|....||:|....|..::
plant   274 VRQRSL-DGNHVVHLSYLEVYNETVRDLLSPGRP----LILRE-DKQGIVAAGLTQYRAYSTDEV 332

  Fly   195 DNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAGSERAVK 259
            ..|:..||::||...|..|..||||||:..|::.....|.:..:. .:|.::||:||||||||:.
plant   333 MALLQRGNQNRTTEPTRCNETSSRSHAILQVIVEYKTRDASMNII-SRVGKLSLIDLAGSERALA 396

  Fly   260 TGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNSRTV 324
            |.....|..||:|||:||..|...|:.|.:   ||     |.:|||:|.||.||||:|||:..||
plant   397 TDQRTLRSLEGANINRSLLALSSCINALVE---GK-----KHIPYRNSKLTQLLKDSLGGSCNTV 453

  Fly   325 MVATISPSADNYEETLSTLRYADRAKRI-VNHAVVNEDPNARIIRELRHEVETLRSMLKHATGSP 388
            |:|.||||:.::.||.:||.:|||||.| |....|||:    :::                .|..
plant   454 MIANISPSSQSFGETQNTLHWADRAKEIRVKECEVNEE----VVQ----------------VGEE 498

  Fly   389 VGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKVEKNKYYLVNLN 453
            .|..|.||.  ..|.|:.|:.         |:|..:||  :|: :::||..|....|..   |::
plant   499 EGADQAKLL--LELQKENSEL---------RVQLAKQQ--QKL-LTLQAENIAAANNNN---NIS 546

  Fly   454 -ADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITIEDSGLYMEPVQGARCFV 517
             ..||::.|:.         ....::.||..        :|.|.:::             ..|| 
plant   547 LTPPSISSLMT---------PPSALTAQQKK--------KPRHSLLS-------------GTCF- 580

  Fly   518 NGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSMCASEPQTPAQLIDYNFARDEIMQNELSN 582
                                        :|:|                :....|.:.:.:.:|:.
plant   581 ----------------------------TPES----------------LKRTKAEEAVKELQLTV 601

  Fly   583 DPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRM---GKITP 644
            ..::..:.|::|:|    .:.::||:.|.      ::::.|..:...|....:..|:   |.:.|
plant   602 KALKMEMERMKREH----GLQMKKQKDEL------MKDLCSRKSEKTPERCKETRRIVTRGSLRP 656

  Fly   645 NTPTSQMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLAEEMEKKTKFSVTLQIPPANL 709
                         :|:::       :||:...|..|.|..|       :|::.:.:|:    ||.
plant   657 -------------KEKEK-------ELKSPSHRFASPVAAA-------KKRSFWDITV----ANT 690

  Fly   710 SP--NRRR 715
            ||  :||:
plant   691 SPALDRRK 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 134/359 (37%)
KISc 6..359 CDD:214526 134/358 (37%)
Kinesin_assoc 356..468 CDD:292801 24/112 (21%)
FHA 446..546 CDD:238017 10/100 (10%)
KIF1B 741..786 CDD:289208
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
AT1G18550NP_173290.4 Kinesin 157..481 CDD:395169 129/345 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.