DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and AT5G27550

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_198107.3 Gene:AT5G27550 / 832815 AraportID:AT5G27550 Length:765 Species:Arabidopsis thaliana


Alignment Length:728 Identity:205/728 - (28%)
Similarity:325/728 - (44%) Gaps:154/728 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPFNRREI--------ELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYS 62
            |:|..|.||.|:.||        |.||    ..|.:..||.:.        ...|.|.|||.|  
plant   133 IRVFCRCRPLNQAEIANGCASVAEFDT----TQENELQILSSD--------SSKKHFKFDHVF-- 183

  Fly    63 LNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQL 127
             .|:|    .||||| ...:.|:.:...|||.|||||||||:||::||.||.|::|:..|..::|
plant   184 -KPDD----GQETVF-AQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPENRGVNYRTLEEL 242

  Fly   128 FSAIANKSTPELM-YKVEVSYMEIYNEKVHDLLDPKPNK--QSLKVREHNVMGPYVDGLSQLAVT 189
            |....:||  .|| :::.||.:|:||||:.|||....|:  :.|:|::.......|.||.:..|.
plant   243 FRCSESKS--HLMKFELSVSMLEVYNEKIRDLLVDNSNQPPKKLEVKQSAEGTQEVPGLVEAQVY 305

  Fly   190 SYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKV-------SRMS 247
            :...:.:|:.:|...|:|.:|..|.:|||||.:..|.           |.||.:       |.:.
plant   306 NTDGVWDLLKKGYAVRSVGSTAANEQSSRSHCLLRVT-----------VKGENLINGQRTRSHLW 359

  Fly   248 LVDLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWL 312
            |||||||||..|....|:||||...|||||:.||.|||.||.:::        .:|||:|.||.:
plant   360 LVDLAGSERVGKVEVEGERLKESQFINKSLSALGDVISALASKTS--------HIPYRNSKLTHM 416

  Fly   313 LKDNLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVN-----HAVVNEDPNARIIRE-LR 371
            |:::|||:.:|:|...||||:.:..|||.:|.:|.|.:.|.:     .|.|:|...::.:.| |:
plant   417 LQNSLGGDCKTLMFVQISPSSADLGETLCSLNFASRVRGIESGPARKQADVSELLKSKQMAEKLK 481

  Fly   372 HEVETLRSMLKHATGSPVGDVQDKLAESENLMKQIS--------QTWEEKLVKTERIQNERQQAL 428
            ||.:..:.:..:     |..:|.:|...|::.:.:.        |..||:  || ||:.| .:||
plant   482 HEEKETKKLQDN-----VQSLQLRLTAREHICRGLQDKVRDLEFQLAEER--KT-RIKQE-SRAL 537

  Fly   429 EKMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQP 493
                  ..||......:::....|   |::.|........|..:..|.|:...|.          
plant   538 ------ATASSTTTTTSRHLRETL---PTIIEKKPPLAPTRMRMPLRRITNFMPQ---------- 583

  Fly   494 EHCVITIEDSGLYMEPVQG-ARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNT----- 552
                         .:|.|| ::.|              .|.....|::..|.:|....||     
plant   584 -------------QQPSQGHSKRF--------------SDTTFKENNNSNRRSSSMDVNTLMKPR 621

  Fly   553 -SMCASEP-QTPAQLIDYN---FARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYE 612
             |..|..| ..|:.:...|   ..|..:....|..:|  ::::.:|...........:.::..|.
plant   622 RSSIAFRPAPAPSAIASSNKTIMPRRRVSIATLRPEP--SSLSSMETPSRPPPSFRGDPRKARYS 684

  Fly   613 RQFQQLRNILSPSTPYAPYAPYDPLRMGKIT--PNTPT---SQMRVEKWAQERDEMFRRSLGQLK 672
            :.|...||:::|:...:......||..|..:  |:.||   .|.:...|:..:.:..|.||..::
plant   685 KLFSPDRNLVTPNAMKSSRFMKSPLGGGGSSWKPSHPTVIALQKKAVVWSPLKFKNRRPSLVAIR 749

  Fly   673 --------TDIMR 677
                    :|::|
plant   750 SSASSSSASDLLR 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 139/375 (37%)
Kinesin_assoc 356..468 CDD:465047 26/120 (22%)
FHA_KIF13 446..547 CDD:438758 14/101 (14%)
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
AT5G27550NP_198107.3 KISc_C_terminal 130..457 CDD:276817 137/364 (38%)
ATG16 <461..537 CDD:462536 19/84 (23%)
Blue background indicates that the domain is not in the aligned region.

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