DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and kif1c

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:XP_031755447.1 Gene:kif1c / 779557 XenbaseID:XB-GENE-997155 Length:1105 Species:Xenopus tropicalis


Alignment Length:989 Identity:376/989 - (38%)
Similarity:532/989 - (53%) Gaps:205/989 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQP----KTFAFDHCFY 61
            ||...:||||||||||.|||..|.||:::|:...|.:.||        |||    |.|.||:.::
 Frog     1 MAGASVKVAVRVRPFNSREIAHDAKCVIQMQGNTTCISNP--------KQPKDSAKNFTFDYSYW 57

  Fly    62 S-LNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESK--GIIPRL 123
            | ...||.|||||..|:..:|..:|.:||:|||.||||||||||||||||||..||:  ||||:|
 Frog    58 SHTTAEDPNFASQCQVYKDIGEEMLLHAFEGYNVCIFAYGQTGSGKSYTMMGKPESEQHGIIPQL 122

  Fly   124 CDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAV 188
            |:.||:.::...:|:|...|||||||||.|:|.|||:|| :|.:|:||||.:|||||:.||:|||
 Frog   123 CEDLFARVSANRSPDLSCSVEVSYMEIYCERVRDLLNPK-SKGNLRVREHPIMGPYVEDLSKLAV 186

  Fly   189 TSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAG 253
            |||.||.:||..|||:|||||||||..||||||||::|.||...|:.|.:..||||::|||||||
 Frog   187 TSYHDIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQKRHDEMTNLDTEKVSKISLVDLAG 251

  Fly   254 SERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLG 318
            ||||..|||.|.|||||:||||||||||.|||.||:..|.||..:  |:|||||.||||||:|||
 Frog   252 SERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMQNKKKKSD--FIPYRDSALTWLLKENLG 314

  Fly   319 GNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSMLKH 383
            |||||.|:|.:||:..||||||||||||||||:|..:||:|||||||:||||:.||..||.:| :
 Frog   315 GNSRTAMIAALSPADINYEETLSTLRYADRAKQIKCNAVINEDPNARLIRELKEEVARLRQLL-Y 378

  Fly   384 ATG--------------------SPVG-----------------------------------DVQ 393
            :.|                    :||.                                   :..
 Frog   379 SQGLEDIVIDDSASAPHPPSPAAAPVSPPPLPGSLAPLASPTQNGQSEPFPEGEDAAEICTEEAM 443

  Fly   394 DKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKV----EKNKYYLVNLNA 454
            ::|.|:|.::.::::||||||.|||.::.||:..|.:||::|:..|..|    .|...:|||||.
 Frog   444 ERLQETEKIIAELNETWEEKLRKTEALRTEREALLAEMGVAVREDGGTVGVFSPKKIPHLVNLNE 508

  Fly   455 DPSLNELLVYYLKDRTLIGGRTISGQ-QPDIQLSGLGIQPEHCVITIE--DSG---LYMEPVQGA 513
            ||.::|.|:|::|:     |.|..|| :.||:|||..|:.:||:...:  .||   :.:||.:||
 Frog   509 DPLMSECLLYHIKE-----GITRVGQVEVDIKLSGQFIKEQHCLFHCDTNPSGEVIVTLEPCEGA 568

  Fly   514 RCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPK----SNNTSMCASEPQTPAQLIDYNFARDE 574
            ..:|||....:...|::|.||:.|.:|.||.|.|:    ....|..|.|  .|::.:|:|||:.|
 Frog   569 ETYVNGKLVTQALVLKSGTRIVMGKNHVFRFNHPEQARLERERSSAAIE--NPSEPVDWNFAQKE 631

  Fly   575 IMQNELSNDPIQTAIARLERQHE-EDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLR 638
            :::.       |....:||.:.. :|.:...:|:::|.:...:|.|          .||..|   
 Frog   632 LLEK-------QGIDIKLEMEKRLQDLEYQYKKEKEEADLTLEQQR----------LYADSD--- 676

  Fly   639 MGKITPNTPTSQMRVEKWAQERDEMFRRSLGQLKTDIM--RANSLVQEANFLAEEMEKKTKFSVT 701
                :.:....:...|.|         |.:..|:..:.  |..|:|:... |....:|:....| 
 Frog   677 ----SGDDSDKRSCEESW---------RLISSLREKVPAGRVQSIVRRCG-LPSSGKKREPIRV- 726

  Fly   702 LQIPPANLSPNRRRGAFVSEPAIL---------VKR----------TNSGSQIWTMEKLENKLID 747
            .|||     ..||.|   .:|..|         ||.          .:|..:|..|     .:|.
 Frog   727 YQIP-----QRRRLG---KDPRWLTLADLKMQAVKEICYEVALNDFKHSRQEIEAM-----SVIK 778

  Fly   748 MREMYQEHKERVLNGLDEDNAKPQDPF------YESQENHNLIGVANIFLEV-----LFHDVKLD 801
            |:|:.:.:.:|.:|..:...|..:|.:      .|.....::.||.::...:     :..:|||.
 Frog   779 MKELCRTYGKRDINEKELWKAVARDVWDTVGVGEEDAGTKSVSGVQDLKAHIDKLTDILQEVKLQ 843

  Fly   802 YHTPIISQQGEVAGRLQ---VEIERIAGQMP-------QDRMCE-----------SVSESSGDSR 845
            .     :.:.|....|:   :::||:   ||       :|.:.|           .:.|.||...
 Frog   844 N-----NMKDEEIRSLRDRMIKMERV---MPLAQDNGDEDYLDEQSLPWYSNENQEIPEPSGSGL 900

  Fly   846 DEYDDPVDPTSNQI 859
            .....|.:|..:|:
 Frog   901 SPDHSPKEPRVDQL 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 222/361 (61%)
KISc 6..359 CDD:214526 222/359 (62%)
Kinesin_assoc 356..468 CDD:292801 52/170 (31%)
FHA 446..546 CDD:238017 40/105 (38%)
KIF1B 741..786 CDD:289208 8/50 (16%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
kif1cXP_031755447.1 KISc_KIF1A_KIF1B 4..355 CDD:276816 222/361 (61%)
Kinesin_assoc 352..524 CDD:406567 53/177 (30%)
FHA 501..601 CDD:238017 40/104 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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