DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and kif1c

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:XP_031755447.1 Gene:kif1c / 779557 XenbaseID:XB-GENE-997155 Length:1105 Species:Xenopus tropicalis


Alignment Length:989 Identity:376/989 - (38%)
Similarity:532/989 - (53%) Gaps:205/989 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQP----KTFAFDHCFY 61
            ||...:||||||||||.|||..|.||:::|:...|.:.||        |||    |.|.||:.::
 Frog     1 MAGASVKVAVRVRPFNSREIAHDAKCVIQMQGNTTCISNP--------KQPKDSAKNFTFDYSYW 57

  Fly    62 S-LNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESK--GIIPRL 123
            | ...||.|||||..|:..:|..:|.:||:|||.||||||||||||||||||..||:  ||||:|
 Frog    58 SHTTAEDPNFASQCQVYKDIGEEMLLHAFEGYNVCIFAYGQTGSGKSYTMMGKPESEQHGIIPQL 122

  Fly   124 CDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAV 188
            |:.||:.::...:|:|...|||||||||.|:|.|||:|| :|.:|:||||.:|||||:.||:|||
 Frog   123 CEDLFARVSANRSPDLSCSVEVSYMEIYCERVRDLLNPK-SKGNLRVREHPIMGPYVEDLSKLAV 186

  Fly   189 TSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAG 253
            |||.||.:||..|||:|||||||||..||||||||::|.||...|:.|.:..||||::|||||||
 Frog   187 TSYHDIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQKRHDEMTNLDTEKVSKISLVDLAG 251

  Fly   254 SERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLG 318
            ||||..|||.|.|||||:||||||||||.|||.||:..|.||..:  |:|||||.||||||:|||
 Frog   252 SERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMQNKKKKSD--FIPYRDSALTWLLKENLG 314

  Fly   319 GNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSMLKH 383
            |||||.|:|.:||:..||||||||||||||||:|..:||:|||||||:||||:.||..||.:| :
 Frog   315 GNSRTAMIAALSPADINYEETLSTLRYADRAKQIKCNAVINEDPNARLIRELKEEVARLRQLL-Y 378

  Fly   384 ATG--------------------SPVG-----------------------------------DVQ 393
            :.|                    :||.                                   :..
 Frog   379 SQGLEDIVIDDSASAPHPPSPAAAPVSPPPLPGSLAPLASPTQNGQSEPFPEGEDAAEICTEEAM 443

  Fly   394 DKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKV----EKNKYYLVNLNA 454
            ::|.|:|.::.::::||||||.|||.::.||:..|.:||::|:..|..|    .|...:|||||.
 Frog   444 ERLQETEKIIAELNETWEEKLRKTEALRTEREALLAEMGVAVREDGGTVGVFSPKKIPHLVNLNE 508

  Fly   455 DPSLNELLVYYLKDRTLIGGRTISGQ-QPDIQLSGLGIQPEHCVITIE--DSG---LYMEPVQGA 513
            ||.::|.|:|::|:     |.|..|| :.||:|||..|:.:||:...:  .||   :.:||.:||
 Frog   509 DPLMSECLLYHIKE-----GITRVGQVEVDIKLSGQFIKEQHCLFHCDTNPSGEVIVTLEPCEGA 568

  Fly   514 RCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPK----SNNTSMCASEPQTPAQLIDYNFARDE 574
            ..:|||....:...|::|.||:.|.:|.||.|.|:    ....|..|.|  .|::.:|:|||:.|
 Frog   569 ETYVNGKLVTQALVLKSGTRIVMGKNHVFRFNHPEQARLERERSSAAIE--NPSEPVDWNFAQKE 631

  Fly   575 IMQNELSNDPIQTAIARLERQHE-EDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLR 638
            :::.       |....:||.:.. :|.:...:|:::|.:...:|.|          .||..|   
 Frog   632 LLEK-------QGIDIKLEMEKRLQDLEYQYKKEKEEADLTLEQQR----------LYADSD--- 676

  Fly   639 MGKITPNTPTSQMRVEKWAQERDEMFRRSLGQLKTDIM--RANSLVQEANFLAEEMEKKTKFSVT 701
                :.:....:...|.|         |.:..|:..:.  |..|:|:... |....:|:....| 
 Frog   677 ----SGDDSDKRSCEESW---------RLISSLREKVPAGRVQSIVRRCG-LPSSGKKREPIRV- 726

  Fly   702 LQIPPANLSPNRRRGAFVSEPAIL---------VKR----------TNSGSQIWTMEKLENKLID 747
            .|||     ..||.|   .:|..|         ||.          .:|..:|..|     .:|.
 Frog   727 YQIP-----QRRRLG---KDPRWLTLADLKMQAVKEICYEVALNDFKHSRQEIEAM-----SVIK 778

  Fly   748 MREMYQEHKERVLNGLDEDNAKPQDPF------YESQENHNLIGVANIFLEV-----LFHDVKLD 801
            |:|:.:.:.:|.:|..:...|..:|.:      .|.....::.||.::...:     :..:|||.
 Frog   779 MKELCRTYGKRDINEKELWKAVARDVWDTVGVGEEDAGTKSVSGVQDLKAHIDKLTDILQEVKLQ 843

  Fly   802 YHTPIISQQGEVAGRLQ---VEIERIAGQMP-------QDRMCE-----------SVSESSGDSR 845
            .     :.:.|....|:   :::||:   ||       :|.:.|           .:.|.||...
 Frog   844 N-----NMKDEEIRSLRDRMIKMERV---MPLAQDNGDEDYLDEQSLPWYSNENQEIPEPSGSGL 900

  Fly   846 DEYDDPVDPTSNQI 859
            .....|.:|..:|:
 Frog   901 SPDHSPKEPRVDQL 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 222/361 (61%)
Kinesin_assoc 356..468 CDD:465047 52/170 (31%)
FHA_KIF13 446..547 CDD:438758 41/106 (39%)
KIF1B 741..786 CDD:463574 8/50 (16%)
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
kif1cXP_031755447.1 KISc_KIF1A_KIF1B 4..355 CDD:276816 222/361 (61%)
Kinesin_assoc 352..524 CDD:465047 53/177 (30%)
FHA_KIF1C 500..601 CDD:438780 40/105 (38%)
Blue background indicates that the domain is not in the aligned region.

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