DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and kif5aa

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_001186705.1 Gene:kif5aa / 566086 ZFINID:ZDB-GENE-070912-141 Length:1033 Species:Danio rerio


Alignment Length:1388 Identity:317/1388 - (22%)
Similarity:527/1388 - (37%) Gaps:452/1388 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYSLNPE 66
            |...|||..|.||.|:.||....|.:...:...|::..           .|::|||..|    |.
Zfish     6 AECNIKVLCRFRPLNQAEILRGDKFLPTFQGDDTVIIG-----------GKSYAFDRVF----PT 55

  Fly    67 DENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGT---QESKGIIPRLCDQLF 128
            :   .:||.|::...:.|:.:...|||..|||||||.|||::||.|.   .:..|||||:.:.:|
Zfish    56 N---TTQEQVYNTCAKQIVKDVLGGYNGTIFAYGQTSSGKTHTMEGNLHDPQQMGIIPRIAEDIF 117

  Fly   129 SAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQD 193
            :.|.:.. ..|.:.::|||.|||.||:.||||  ..|.:|.|.|.....|||.|.::..|:|.::
Zfish   118 NHIFSMD-ENLEFHIKVSYFEIYMEKIRDLLD--VTKTNLSVHEDKNRVPYVKGCTERFVSSPEE 179

  Fly   194 IDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQ--ILTDQATGVSGEKVSRMSLVDLAGSER 256
            :.:::.||..:|.||.||||..|||||::|.:.:.|  :.|:|      :...::.||||||||:
Zfish   180 VMDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQEHVETEQ------KLCGKLYLVDLAGSEK 238

  Fly   257 AVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNS 321
            ..||||.|..|.|..||||||:.||.|||.||:       |....||||||.:|.:|:|:||||.
Zfish   239 VSKTGAAGAVLDEAKNINKSLSALGNVISALAE-------GTKSHVPYRDSKMTRILQDSLGGNC 296

  Fly   322 RTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSMLKHATG 386
            ||.|....|||:.|..||.|||.:..|||.|.|.|.:|                           
Zfish   297 RTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASIN--------------------------- 334

  Fly   387 SPVGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKVEKNKYYLVN 451
                            ::..::.|:.|..|            ||            ||||     
Zfish   335 ----------------LELTAEQWKRKYEK------------EK------------EKNK----- 354

  Fly   452 LNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITIEDSGLYMEPVQGARCF 516
                         .|:|         |.|:.:::|                           |.:
Zfish   355 -------------SLRD---------SMQRLELEL---------------------------RRW 370

  Fly   517 VNGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSMCASEPQTPAQLIDYNFARDEIMQNELS 581
            .||    ||.|                             ...||.|.::..:.:.:..:.||.|
Zfish   371 RNG----EKVP-----------------------------ETEQTDADVVKLDVSEETSLDNEKS 402

  Fly   582 NDPIQTAIARLERQHEEDKQVA------LEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMG 640
                    ...:|:.|.|...:      .|::||:||.:.::|...|....        |.:.: 
Zfish   403 --------CERQRERERDSDTSSIVVRISEEERQKYEEEIRKLYRQLDDKD--------DEINL- 450

  Fly   641 KITPNTPTSQMRVEKWAQ---ERDEMF----------RRSLGQLKTDIMRANSLVQEANFLAEEM 692
                   ..|: |||..:   ::||:.          :..||:|:|:...|.:.|:|.....||:
Zfish   451 -------QCQL-VEKLKEQILDQDELLASTRGDSDKVQTELGRLQTESESAKAEVREVLQALEEL 507

  Fly   693 ----EKKTKFSVTLQIPPANLSPNRRRGAFVSEPAILVKRTNSGSQIWTMEKLENKLIDMREMYQ 753
                ::|::     ::...:|. |::....:|.     |..|       :.:||.:|..|:|:..
Zfish   508 AVNYDQKSQ-----EVEEKSLH-NKQLAEQLSH-----KMAN-------LMELEAELAQMQEVSS 554

  Fly   754 EHKER---VLNGLDEDNAKPQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAG 815
            :.::|   |||||.:|          ..|..:::|...:.|.|                  |::|
Zfish   555 QQRKRIADVLNGLMKD----------LSEFSSIVGNGELKLPV------------------EISG 591

  Fly   816 RLQVE-------IERIAGQM-PQDRMCESVSESSGDSRDEYDDPVDPTSNQITCRVTIKCASGLP 872
            .::.|       |.:|..:: ...:.|..:.    :.:.|....::.||.:::.           
Zfish   592 AIEEEFTVARLYISKIKSEVKSMVKRCRQLE----NMQLECHRKMEETSRELSS----------- 641

  Fly   873 LSLSNFVFCQYTFWGHQEMVVPVINAESTAHDQNMVFKFEHTQDFTVTINEEFLEHCIEGALS-- 935
                    ||.....|:..:     ...|.:.||:..|....:|....::||.  :.::.:.|  
Zfish   642 --------CQLLISQHEAKI-----RSLTEYMQNVEQKKRQLEDNYDALSEEL--YTLQNSESHV 691

  Fly   936 IEVWGHRSAGFSKTKGWEVEQQQAKARSLV---DRWAELSRKIELWVEIHE---LNDNGEYSPVE 994
            .|:.|...|      ..|.:.::|..|..:   .|..:|||   |..||:|   |.|       |
Zfish   692 AELDGGEKA------DREADGKKAAVRPALHAESRQTQLSR---LRDEINEKQRLID-------E 740

  Fly   995 VTNRNEVLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQSIVNVAIGSVTVRSRLQRPLDSYQ 1059
            :|::|:.|...:..:|....   |::::....|..|..:                       |:|
Zfish   741 LTDKNQALELELAHVRSSFS---NLKLQDDSKSACLEQM-----------------------SFQ 779

  Fly  1060 EEDLTVLREKWSEALGRRRQYLDQQIQMLIKKEEKNEQERERELSLVH-------QWVSLTEERN 1117
            :|               |.:...|.::.|       |:...|||..:|       |.::...:::
Zfish   780 QE---------------RHEQSKQDLKGL-------EETVARELQTLHNLRKLFVQDLTTRVKKS 822

  Fly  1118 AVLVPAPGSGIPGAPASWEPPSGMEPHVPVLFLNLNGDDLSAQNTNDELSVAGINSILSKEHGHK 1182
            :.:.|....|           |..:.. .:.||..|.|.|:..:.......|.:...|.|.....
Zfish   823 SEIGPDDSGG-----------SNTQKQ-KISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRL 875

  Fly  1183 FYTLQILQHLD---KDVCCVASWDSSMHD----SQALNRVTEANERVYLILRTT-------VRLS 1233
            ..|.:.::.|:   ||     :...:|:|    .|.:.|:.:|....|.:.|..       ||..
Zfish   876 RSTAERVRALETALKD-----AKQGAMNDRRRYQQEVERIRDAMRLRYPLRRPNAAQIAKPVRPG 935

  Fly  1234 H------PAPMDLVLRKRLSINIKKGQTLTDRLKKFRLVRGENAIWQSGV-TYEVVSNIP----- 1286
            |      |....:....:.:.:....:.|.|  :|....:..|.:..|.| :.:::|:.|     
Zfish   936 HHVTATSPTSFSVTRASKPATSYSNARFLQD--EKMENSQKTNTVGYSTVRSIDILSSCPLDVEN 998

  Fly  1287 KASEELEDRESLAQLAASGDDCS 1309
            ..|.::.|..|.....:..||.|
Zfish   999 GNSTDINDNRSDVHCGSMVDDAS 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 145/359 (40%)
Kinesin_assoc 356..468 CDD:465047 12/111 (11%)
FHA_KIF13 446..547 CDD:438758 12/100 (12%)
KIF1B 741..786 CDD:463574 13/47 (28%)
DUF3694 989..1243 CDD:463599 46/280 (16%)
CAP_GLY 1785..1850 CDD:460154
kif5aaNP_001186705.1 KISc_KHC_KIF5 7..327 CDD:276820 142/353 (40%)
SMC_prok_B <334..614 CDD:274008 80/504 (16%)
SMC_N 478..>809 CDD:481474 86/470 (18%)
Khc_CBD_cc 842..911 CDD:467880 16/73 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.