DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and sub

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_001286548.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster


Alignment Length:580 Identity:151/580 - (26%)
Similarity:245/580 - (42%) Gaps:159/580 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIE------RKQPKTFAFDHCFYSLNP 65
            :|.:|:||     ::..:|..:..|:...::.:.    |::      .:..|.|.|...|     
  Fly    89 QVFLRLRP-----VKDASKAYIVSEEANVLITSC----KVDSTSNNVNRMEKHFGFTSIF----- 139

  Fly    66 EDENFASQETVFD-CVGRGILDNAFQGYNAC--IFAYGQTGSGKSYTMMGTQESKGIIPRLCDQL 127
              ::...|..::| |||..|::      ..|  |..||.:||||:||::|.....|||||..:.:
  Fly   140 --DSTVGQRDIYDTCVGPKIME------EECVTIMTYGTSGSGKTYTLLGDDVRAGIIPRALENI 196

  Fly   128 FS-----------------------------------------------------------AIAN 133
            |:                                                           ....
  Fly   197 FTIYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFET 261

  Fly   134 KSTPELMYKVEVSYMEIYNEKVHDLL--DPKPNK------QSLKV---REHNVMGPYVDGLSQLA 187
            |::.::...|.||::|||||.|:|||  .||.:|      ::||:   :.|    .::.||:.:.
  Fly   262 KASTDVSVLVWVSFVEIYNELVYDLLAIPPKQDKLGEVPRKNLKIVGNKGH----VFIKGLTSVF 322

  Fly   188 VTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLA 252
            |||.::...|:..|.:..|.|:|::||.|||||.||:|   .||....:|::.:  |.....|||
  Fly   323 VTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCVFTV---DILKYNRSGITTQ--SSYKFCDLA 382

  Fly   253 GSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNL 317
            ||||...||..|.||||..|||.||..||..:..   .|..:|..|...:|||||.||.||:..|
  Fly   383 GSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDA---ASTVQKKKNADIIPYRDSKLTMLLQAAL 444

  Fly   318 GGNSRTVMVATISPSADNYEETLSTLRYADRAKRIV-------NHAVVN---------------- 359
            .|..:..|:.|::|....|||.|:.|.:|..||.|:       .|.|..                
  Fly   445 LGKEKLAMIVTVTPLDKYYEENLNVLNFASIAKNIIFKEPVIKQHRVSYCGFMEFSKMSTCEGGD 509

  Fly   360 -----EDPNARI---IRELRH----EVETLRSMLKHATGSPVGDVQDKLAESENLMKQISQTWEE 412
                 ||.|.|:   |.:|::    :::.|...|:....:...::      .:|..||.....|:
  Fly   510 YTKELEDENVRLQLEIEQLKYDHVLQMQLLEEKLRRELTATYQEI------IQNNKKQYEDECEK 568

  Fly   413 KLVKTERIQNERQQALEKMGISVQASGIKVE----KNKYYLVNLNADPSLNELLVYYLKD 468
            ||:..:| ::|...:.::.....|...:|.|    ||.....:::.||:.::..:..|.|
  Fly   569 KLLIAQR-ESEFMLSSQRRRYEEQIEDLKDEIEELKNPASDTDISDDPNESKSPIEILDD 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 126/437 (29%)
KISc 6..359 CDD:214526 126/437 (29%)
Kinesin_assoc 356..468 CDD:292801 25/143 (17%)
FHA 446..546 CDD:238017 4/23 (17%)
KIF1B 741..786 CDD:289208
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
subNP_001286548.1 KISc 89..477 CDD:276812 121/421 (29%)
Kinesin 93..479 CDD:278646 122/419 (29%)
GBP_C <512..603 CDD:303769 19/97 (20%)
coiled coil 576..586 CDD:293879 1/9 (11%)
coiled coil 592..603 CDD:293879 2/10 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437744
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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