DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and sub

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster


Alignment Length:580 Identity:151/580 - (26%)
Similarity:245/580 - (42%) Gaps:159/580 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIE------RKQPKTFAFDHCFYSLNP 65
            :|.:|:||     ::..:|..:..|:...::.:.    |::      .:..|.|.|...|     
  Fly    89 QVFLRLRP-----VKDASKAYIVSEEANVLITSC----KVDSTSNNVNRMEKHFGFTSIF----- 139

  Fly    66 EDENFASQETVFD-CVGRGILDNAFQGYNAC--IFAYGQTGSGKSYTMMGTQESKGIIPRLCDQL 127
              ::...|..::| |||..|::      ..|  |..||.:||||:||::|.....|||||..:.:
  Fly   140 --DSTVGQRDIYDTCVGPKIME------EECVTIMTYGTSGSGKTYTLLGDDVRAGIIPRALENI 196

  Fly   128 FS-----------------------------------------------------------AIAN 133
            |:                                                           ....
  Fly   197 FTIYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFET 261

  Fly   134 KSTPELMYKVEVSYMEIYNEKVHDLL--DPKPNK------QSLKV---REHNVMGPYVDGLSQLA 187
            |::.::...|.||::|||||.|:|||  .||.:|      ::||:   :.|    .::.||:.:.
  Fly   262 KASTDVSVLVWVSFVEIYNELVYDLLAIPPKQDKLGEVPRKNLKIVGNKGH----VFIKGLTSVF 322

  Fly   188 VTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLA 252
            |||.::...|:..|.:..|.|:|::||.|||||.||:|   .||....:|::.:  |.....|||
  Fly   323 VTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCVFTV---DILKYNRSGITTQ--SSYKFCDLA 382

  Fly   253 GSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNL 317
            ||||...||..|.||||..|||.||..||..:..   .|..:|..|...:|||||.||.||:..|
  Fly   383 GSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDA---ASTVQKKKNADIIPYRDSKLTMLLQAAL 444

  Fly   318 GGNSRTVMVATISPSADNYEETLSTLRYADRAKRIV-------NHAVVN---------------- 359
            .|..:..|:.|::|....|||.|:.|.:|..||.|:       .|.|..                
  Fly   445 LGKEKLAMIVTVTPLDKYYEENLNVLNFASIAKNIIFKEPVIKQHRVSYCGFMEFSKMSTCEGGD 509

  Fly   360 -----EDPNARI---IRELRH----EVETLRSMLKHATGSPVGDVQDKLAESENLMKQISQTWEE 412
                 ||.|.|:   |.:|::    :::.|...|:....:...::      .:|..||.....|:
  Fly   510 YTKELEDENVRLQLEIEQLKYDHVLQMQLLEEKLRRELTATYQEI------IQNNKKQYEDECEK 568

  Fly   413 KLVKTERIQNERQQALEKMGISVQASGIKVE----KNKYYLVNLNADPSLNELLVYYLKD 468
            ||:..:| ::|...:.::.....|...:|.|    ||.....:::.||:.::..:..|.|
  Fly   569 KLLIAQR-ESEFMLSSQRRRYEEQIEDLKDEIEELKNPASDTDISDDPNESKSPIEILDD 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 126/437 (29%)
Kinesin_assoc 356..468 CDD:465047 25/143 (17%)
FHA_KIF13 446..547 CDD:438758 4/23 (17%)
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
subNP_611260.1 KISc 89..477 CDD:276812 121/421 (29%)
GBP_C <512..603 CDD:293879 19/97 (20%)
coiled coil 576..586 CDD:293879 1/9 (11%)
coiled coil 592..603 CDD:293879 2/10 (20%)
Blue background indicates that the domain is not in the aligned region.

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