DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and kif18a

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_956533.1 Gene:kif18a / 393209 ZFINID:ZDB-GENE-040426-862 Length:895 Species:Danio rerio


Alignment Length:660 Identity:204/660 - (30%)
Similarity:312/660 - (47%) Gaps:139/660 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLE------------KIERKQPK--TFAF 56
            :||.|||||.|.:|.:.:.|.:|.:.....::.:|...|            .:.::..|  .|.|
Zfish    10 VKVVVRVRPLNDKEKDGNFKKVVHVVDNHMLVFDPKEEEVTFFRGQRVGNRDVRKRANKDLKFVF 74

  Fly    57 DHCFYSLNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIP 121
            |..|     .:|  :||..||:...:.|:|....|||..:||||.||:||::||:||..|.|::.
Zfish    75 DSVF-----GEE--SSQIEVFENTTKAIVDGVLNGYNCTVFAYGATGAGKTHTMLGTSNSPGVMF 132

  Fly   122 RLCDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQL 186
            ....:||:.: :....:.::.|..||:|:|||::.|||   .|...|.|||....|..|.||:..
Zfish   133 LTMKELFARM-DLIKEDKVFNVAFSYLEVYNEQIRDLL---TNSGPLAVREDGSNGVVVQGLTLH 193

  Fly   187 AVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVS-GEKVSRMSLVD 250
            ...|.:.|...:..||::||...|:|||.||||||||.:.|.|  .|:...:: ..:|::|||:|
Zfish   194 QPKSAEHILEALDYGNRNRTQHPTDMNATSSRSHAVFQIYLRQ--QDKTASLNPNVRVAKMSLID 256

  Fly   251 LAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKD 315
            |||||||..|...|.||:||:|||:||..||.||:.||:....|     ..:|||||.||.||||
Zfish   257 LAGSERASATNTKGARLREGANINRSLLALGNVINTLANPKCKK-----THIPYRDSKLTRLLKD 316

  Fly   316 NLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSM 380
            :||||.||||:|.:|||:.:||:|.:||:||:|||.|.:                     ||||.
Zfish   317 SLGGNCRTVMIANVSPSSLSYEDTHNTLKYANRAKEIKS---------------------TLRSN 360

  Fly   381 LKHATGSPVGD---VQDKLAESENLMKQISQTWEEKLVKTER-----IQNERQQALEKMGISVQ- 436
            :. :..|.:|.   :.:|......::||..:.:||:  |.|.     |..:::...|||..|:: 
Zfish   361 VM-SLDSHIGQYAIICEKQKAEIVMLKQKLKEYEER--KAEAPALNPISIQKRAEFEKMSESLRS 422

  Fly   437 --ASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQ-----PD----------- 483
              :..:|:.|.     :|:.:..|||       .|..:..|....||     ||           
Zfish   423 VFSDRLKLRKE-----HLDIEKQLNE-------SRLTMRHRESWHQQSLIFFPDNKAERATCKYE 475

  Fly   484 IQLSGLGIQPEHCVITIEDSGLYMEPVQGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPK 548
            .:|:.|....||         |....::..:||......:.:  ::|..::|..:.|        
Zfish   476 RKLASLKSHQEH---------LQQRLMESEKCFQENEGWLHR--IENEMKLLGHDGH-------- 521

  Fly   549 SNNTSMCASEPQTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYER 613
                        ||.:|           :.||....:|..|:.|: ||.|.....:..|.||...
Zfish   522 ------------TPEEL-----------KKELQCHQLQLQISDLQ-QHMEHMSHLISVQDQENTH 562

  Fly   614 QFQQLRNILS 623
            ..:.:..:||
Zfish   563 THKLVNALLS 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 148/367 (40%)
Kinesin_assoc 356..468 CDD:465047 24/122 (20%)
FHA_KIF13 446..547 CDD:438758 20/116 (17%)
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
kif18aNP_956533.1 KISc_KIP3_like 9..353 CDD:276821 147/360 (41%)
SMC_N <345..572 CDD:481474 60/305 (20%)
Blue background indicates that the domain is not in the aligned region.

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