DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and klp-3

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_001022332.1 Gene:klp-3 / 191697 WormBaseID:WBGene00002216 Length:598 Species:Caenorhabditis elegans


Alignment Length:369 Identity:124/369 - (33%)
Similarity:194/369 - (52%) Gaps:44/369 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPFNRREIELDTKCIV--EMEKQQTILQNPPPLEK----IERKQPKTFAFDHCFYSLN 64
            |:|..|:||....|.:.....:|  ||:.....:.|.....|    .::..|..|:.|..|..::
 Worm   246 IRVFYRIRPQLASETDNQKPVVVIDEMDNGVVHVSNTTGTRKTSAGADKVIPTDFSQDQIFNEVS 310

  Fly    65 PEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQLFS 129
            |                  |:.:...|||.||||||.|||||:|||.|.....||..|...|||.
 Worm   311 P------------------IITSCIDGYNVCIFAYGHTGSGKTYTMDGPVTMPGINQRAIMQLFE 357

  Fly   130 AIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQDI 194
            . |.:.|.::.|.::|:.|||||||:.|||:  .:..:|.:|:.......:.||.:::|.|.:::
 Worm   358 T-AKERTGDIKYDIKVAMMEIYNEKIRDLLN--TSNTNLAIRQTEEGRSSIPGLEEVSVNSAEEV 419

  Fly   195 DNLMTEGNKSRTVAATNMNAESSRSHAVFSVVL--TQILTDQATGVSGEKVSRMSLVDLAGSERA 257
            ...:..|.|::.||||..|.||||||.:..|::  |.::|...|      |.|::|||||||||.
 Worm   420 TETLARGRKNKAVAATEANIESSRSHVIVRVLVSATNLITKATT------VGRLNLVDLAGSERV 478

  Fly   258 VKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNSR 322
            .:|.|.|..|||...|||||:.||.|:..|..        |.|.:|:|:..||.:|:|:|.|:|:
 Worm   479 SQTNATGQLLKEAQAINKSLSELGNVVLALRQ--------NQKHIPFRNCQLTRILEDSLNGDSK 535

  Fly   323 TVMVATISPSADNYEETLSTLRYADRAKRI-VNHAVVNEDPNAR 365
            |:::..:||.|.:..|::|::.:|::..:: .....:..:|..|
 Worm   536 TLVIVHLSPDAKSLNESISSVNFAEKIGQVFTKSGTMKREPTRR 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 122/361 (34%)
Kinesin_assoc 356..468 CDD:465047 2/10 (20%)
FHA_KIF13 446..547 CDD:438758
KIF1B 741..786 CDD:463574
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
klp-3NP_001022332.1 PRK03918 <18..>255 CDD:235175 4/8 (50%)
KISc_C_terminal 243..566 CDD:276817 122/354 (34%)
Blue background indicates that the domain is not in the aligned region.

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