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Protein Alignment Khc-73 and klp-17

DIOPT Version :10

Sequence 1:	NP_001261000.1	Gene:	Khc-73 / 36718	FlyBaseID:	FBgn0019968	Length:	1957	Species:	Drosophila melanogaster
Sequence 2:	NP_496446.3	Gene:	klp-17 / 174750	WormBaseID:	WBGene00002227	Length:	471	Species:	Caenorhabditis elegans

Alignment Length:	371	Identity:	126/371 - (33%)
Similarity:	191/371 - (51%)	Gaps:	84/371 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 KIKVAVRVRPFNR-----------REIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDH 58
            :|:||:|||.|.|           .|::|          |||            ..|..|::|:|
Worm   145 QIRVAIRVRDFERDGSSNFSIISQNEVQL----------QQT------------TGQSNTYSFEH 187

  Fly    59 CFYSLNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMG--TQESKGIIP 121
            .|:....:...|...:.:..|        |..|.|.|:.|||.|||||::||.|  :.:|:|:||
Worm   188 VFFPPTAQSGVFGEIKELIMC--------ALHGKNVCLIAYGPTGSGKTFTMRGEDSADSEGVIP 244

  Fly   122 RLCDQLFSAIANKSTPELM-----YKVEVSYMEIYNEKVHDLLDPKPNKQSLKVR----EHNVMG 177
            |    ....:..:|..:|.     ||.:.|::|:|||:|:||||   .||.|:|:    :.||:
Worm   245 R----AIRFMLEQSKRDLAMIGWNYKFQASFIEVYNEEVYDLLD---GKQKLEVKINGSKTNVV- 301

  Fly   178 PYVDGLSQLAVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEK 242
                ||.::.:.:..|:|.::...:..|:||:|..|..||||||:|     ||..| ....|||.
Worm   302 ----GLKKIEIGNISDVDVILNLADSQRSVASTASNEHSSRSHAIF-----QIFVD-GQNASGEM 356

  Fly   243 VS-RMSLVDLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVI-SKLADQSNGKKSGNDKFVPYR 305
            |. .::||||||||||.:|.|.|.:..|.:|||:||:||...| :::...|:         ||||
Worm   357 VQCCLNLVDLAGSERAKETQARGKQFTELTNINQSLSTLKKCIRAQMTKMSH---------VPYR 412

  Fly   306 DSVLTWLLKDNLG-GNSRTVMVATISPSADNYEETLSTLRYADRAK 350
            ||.||.:|::.|| |:|:|:.:|..:|.  :..||..||.:....:
Worm   413 DSKLTMVLREYLGAGSSKTMFIAHANPR--DVAETKRTLEFTSELR 456

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.