DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and Kif1c

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_665884.2 Gene:Kif1c / 113886 RGDID:70928 Length:1100 Species:Rattus norvegicus


Alignment Length:1291 Identity:424/1291 - (32%)
Similarity:585/1291 - (45%) Gaps:409/1291 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYS-LN 64
            ||...:||||||||||.||...|.||:|.|:...|.:.||    |..:..||:|.||:.::| .:
  Rat     1 MAGASVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINP----KQSKDAPKSFTFDYSYWSHTS 61

  Fly    65 PEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQE--SKGIIPRLCDQL 127
            .||..||||:.|:..:|..:|.:||:|||.|||||||||:||||||||.||  .:||:|:||:.|
  Rat    62 VEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQQGIVPQLCEDL 126

  Fly   128 FSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQ 192
            ||.:....:.:|.|.|||||||||.|:|.|||:|| ::.||:||||.::||||..||:||||||.
  Rat   127 FSRVNVNQSAQLSYSVEVSYMEIYCERVRDLLNPK-SRGSLRVREHPILGPYVQDLSKLAVTSYA 190

  Fly   193 DIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAGSERA 257
            ||.:||..|||:|||||||||..||||||||::|.||...||.||:..||||::|||||||||||
  Rat   191 DIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVDLAGSERA 255

  Fly   258 VKTGAVGDRLKEGSNINKSLTTLGLVISKLAD-QSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNS 321
            ..:||.|.|||||:||||||||||.|||.||| ||..:||   .|:||||||||||||:||||||
  Rat   256 DSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKS---DFIPYRDSVLTWLLKENLGGNS 317

  Fly   322 RTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSM------ 380
            ||.|:|.:||:..||||||||||||||.|:|..:||:|||||||:||||:.||..||.:      
  Rat   318 RTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRELLMAQGL 382

  Fly   381 -------LKHATGSPVG---------------------------------------DVQDKLAES 399
                   ||...|||.|                                       :..::|.|:
  Rat   383 SASALGGLKVEEGSPGGVLPAASSPPAPASPSSPPPHNGELEPSFSPSAEPQIGPEEAMERLQET 447

  Fly   400 ENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKV----EKNKYYLVNLNADPSLNE 460
            |.::.::::||||||.|||.::.||:..|.:||::|:..|..|    .|...:|||||.||.::|
  Rat   448 EKIIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPLMSE 512

  Fly   461 LLVYYLKDRTLIGGRTISGQ-QPDIQLSGLGIQPEHCVITI--EDSG---LYMEPVQGARCFVNG 519
            .|:|::||     |.|..|| ..||:|:|..|:.:||:...  :..|   :.:||.:||..:|||
  Rat   513 CLLYHIKD-----GVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNG 572

  Fly   520 SAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSM---CASEPQTPAQLIDYNFARDEIMQNELS 581
            ....|...|::|:||:.|.:|.||.|.|:......   ....|..|::.:|:|||:.|:::    
  Rat   573 KLVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNFAQKELLE---- 633

  Fly   582 NDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGKITPNT 646
                         |...|.::.:||:.|:.|.|::                              
  Rat   634 -------------QQGIDIKLEMEKRLQDLENQYR------------------------------ 655

  Fly   647 PTSQMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLA-----EEMEKKT-------KFS 699
                       :|::|               |:.|:::....|     |:.:|::       ..|
  Rat   656 -----------KEKEE---------------ADLLLEQQRLYADSDSGEDSDKRSCEESWRLISS 694

  Fly   700 VTLQIPPANLSPNRRRGAFVSEPAILVKRTNSGSQIWTMEKLENKLIDMREMYQEHKERVLNGLD 764
            :..|:||..:.             .:|||....|        ..|....|.:||..:.|.|.|  
  Rat   695 LREQLPPNTVQ-------------TIVKRCGLPS--------SGKRRAPRRVYQIPQRRRLQG-- 736

  Fly   765 EDNAKPQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAGRLQVEIERIAGQMP 829
                  :||.:.:..:..:..|..|..||...|.:   |           ||  .|||.:|. :.
  Rat   737 ------KDPRWATMADLKMQAVKEICYEVALADFR---H-----------GR--AEIEALAA-LK 778

  Fly   830 QDRMCESVS--ESSGD-----SRDEYDDPVDPTSNQITCRVTIKCASGLPLSLSNFVFCQYTFWG 887
            ...:|.:..  |..||     :||.:|                                      
  Rat   779 MRELCRTYGKPEGPGDAWRAVARDVWD-------------------------------------- 805

  Fly   888 HQEMVVPVINAESTAHDQNMVFKFEHTQDFTVTINEEFLEHC-------IEGALSIEVWGHRSAG 945
                                            |:.||  |.|       .|||...||...| |.
  Rat   806 --------------------------------TVGEE--EGCGGGGGGGEEGARGAEVEDLR-AH 835

  Fly   946 FSKTKG--WEVEQQQA----KARSLVDRWAELSRKIELWVEIHELNDNGE-----YSPVEVTNRN 999
            ..|..|  .||:.|.:    :.::|.||...:.|.|.|..::.:  ||.|     ::|.|     
  Rat   836 IDKLTGILQEVKLQNSSKDRELQALRDRMLRMERVIPLTQDLED--DNEESGLVTWAPPE----- 893

  Fly  1000 EVLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQSIVNVAIGSVTVRSRLQRPLDSYQEEDLT 1064
                 |...:.:......:..|:|                    |...:|..:| :....|||..
  Rat   894 -----GSEAVEEAVSNDHSPAVRP--------------------SSPPQSSWER-VSRLMEEDPA 932

  Fly  1065 VLREKWSEALGRRRQYLDQQIQM---------------------------LIKKEEKNEQERERE 1102
            ..|       ||.|....:|:::                           |....:.|.|.||  
  Rat   933 FRR-------GRLRWLKQEQLRLQGLQGSGGRGGGLRRPPARFVPPHDCKLRFPFKSNPQHRE-- 988

  Fly  1103 LSLVHQWVSLTEERNAVLVPAPGSG------------IPGAPASWEPPSGMEPHVP 1146
                 .|            |..|||            .|..|.:..|||...||.|
  Rat   989 -----SW------------PGMGSGEAPGPQPPEEVTAPPPPPNRRPPSPRRPHRP 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 221/358 (62%)
Kinesin_assoc 356..468 CDD:465047 54/167 (32%)
FHA_KIF13 446..547 CDD:438758 41/106 (39%)
KIF1B 741..786 CDD:463574 9/44 (20%)
DUF3694 989..1243 CDD:463599 35/202 (17%)
CAP_GLY 1785..1850 CDD:460154
Kif1cNP_665884.2 KISc_KIF1A_KIF1B 4..355 CDD:276816 221/358 (62%)
Kinesin_assoc 352..522 CDD:465047 56/174 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..435 1/36 (3%)
FHA_KIF1C 498..599 CDD:438780 40/105 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..924 5/44 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 949..1100 18/98 (18%)
Blue background indicates that the domain is not in the aligned region.

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