DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt12

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001413928.1 Gene:Galnt12 / 313233 RGDID:1562001 Length:576 Species:Rattus norvegicus


Alignment Length:578 Identity:220/578 - (38%)
Similarity:309/578 - (53%) Gaps:51/578 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LVRAAALRGHG-----RERFEAYSDSENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSG 101
            |:...||.|.|     |.|.............|....|.  :.:..|....:|...:.|.:.|.|
  Rat    21 LLALLALAGLGAVLRARSRSGTVDPVPTRTPHPGRHEPV--LPRPPLPADALGAKGEAVRLQLQG 83

  Fly   102 AAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLL 166
            ......:|..::..:|..||::::.:|.:.:..||||.:.::|.|:||..||||.|:||.:|.||
  Rat    84 EELRLQEESVQRHQINIYLSDRISLHRRLPERWNPLCREVKYDYDNLPKTSVVIAFYNEAWSTLL 148

  Fly   167 RTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAG 231
            |||:|.|.|..:..|:|:|||||.||...|...|...: :::|  ||.::|...|.||:||||.|
  Rat   149 RTVYSVLETSPDILLEEVILVDDYSDREHLKEPLANEL-SQLP--KVRLIRASKREGLVRARLLG 210

  Fly   232 ARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGF 296
            |..|.|:||.|||.|||.:.||.|||||||.|..::|:.|:|||||.|.|:|..|..:. |:|||
  Rat   211 ASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEYLGNSGEP-QIGGF 274

  Fly   297 QWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGE 361
            .|...|.|..:|:||::..|......|      ||||||||||:.:|||..:||||..|:.||||
  Rat   275 DWRLVFTWHVVPQRERKLMRSPIDVIR------SPTMAGGLFAVSKRYFEYLGSYDTGMEVWGGE 333

  Fly   362 NLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNR 426
            |||.||||||||||:||.|||.|||:|    |.:.|..|.....|:.|.|.||||::..:::...
  Rat   334 NLEFSFRIWQCGGTLETHPCSHVGHVF----PKQAPYSRSKALANSVRAAEVWMDDFKELYYHRN 394

  Fly   427 PDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNI---CLD- 487
            |..:.. ..||||.|..||.||:||.|:|:|..:|||..||......:|.:.  |..:   ||| 
  Rat   395 PQARLE-PFGDVTERKKLRAKLQCKDFKWFLDTVYPELHVPEDRPGFFGMLE--NRGLRGYCLDY 456

  Fly   488 -DLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNEL----SCATVQHSESPPYRVVMVPCM 547
             ...:||.:.:...||.|..:.| :|.|.:|:...:|...    :|..|:..:..   ::|..|.
  Rat   457 NPPSENNVEGHQVLLYLCHGMGQ-NQFFEYTSRQEIRYNTRQPEACIAVEEGKDV---LIMDLCK 517

  Fly   548 ----ENDEFNEQWRYEHQHIIHSNTGMCLDHQGLKSLDDAQVAP----CDPHSESQRW 597
                ||.||..|   |...::|..:|.|:  :..:...|...||    |. .|::|||
  Rat   518 DTVPENQEFVLQ---EDGTLVHKQSGKCV--EATEKEFDTSFAPHLRDCS-SSDNQRW 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 152/308 (49%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 36/147 (24%)
Galnt12NP_001413928.1 None

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