DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt18

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:644 Identity:192/644 - (29%)
Similarity:290/644 - (45%) Gaps:116/644 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LVALCFIL------------------YSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSE 63
            ||:.|.||                  .:.|...|  :||  ||..:....:|...:..|.....|
  Rat    10 LVSTCVILSGMTNIICLLYVGWVTNYIASVYVRG--QEP--APDKKLEEDKGDTLKIIERLDHLE 70

  Fly    64 NEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIAL--------NEEL 120
            |.|.:...::|.:     ..:.:.....:..:..|........|    :::||        |..|
  Rat    71 NVIKQHIQEAPAK-----PEEAEAEPFTDSSLFAHWGQELSPEG----RRVALKQFQYYGYNAYL 126

  Fly   121 SEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEII 185
            |::|..:|.:.|.|...|....| .||||..|:|.||.||..|||||::||.:.......|||||
  Rat   127 SDRLPLDRPLPDLRPSGCRNLSF-PDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEII 190

  Fly   186 LVDDGSDNVELGAKLDYY---VRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHC 247
            ||||.|.|.||..||..|   |..:.| |.:.::|...:.||||:|::|.|.||..|:...|||.
  Rat   191 LVDDNSSNEELKEKLTEYVDKVNGQKP-GFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHV 254

  Fly   248 EGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREK 312
            |.|:||.||:|.||||:|..::.|..|.|..::|:...   ......||.|.....::|.|    
  Rat   255 EFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEIEE---YPLAAQGFDWELWCRYLNPP---- 312

  Fly   313 QRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIE 377
               :...|.|....|..||.:. |.|.:||:||.|:|..||.|:.:||||:|:..|:|||||::|
  Rat   313 ---KAWWKLENSTAPIRSPALI-GCFIVDRQYFEEIGLLDEGMEVYGGENVELGIRVWQCGGSVE 373

  Fly   378 TIPCSRVGHIFRDFHPYKFPNDRDTH-GINTARMALVWMDEYINIFFL--NRPDLKFHADIGDVT 439
            .:||||:.||.|...||  ..|...| ..|..|:|.|||||:.:..::  |.|......||||:|
  Rat   374 VLPCSRIAHIERAHKPY--TEDLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDIT 436

  Fly   440 HRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNSNICLDDLLQNNEKPYNAGLYP 503
            .|..|||:|:||:|.|||.::|||..: ..|:..:|.: :::.:::|.|........|.   :|.
  Rat   437 ARKALRKQLQCKTFRWYLVSVYPEMRM-YSDIIAYGVLQNSLKTDLCFDQGPDTENVPI---VYI 497

  Fly   504 CGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRV-VMVPCMENDE---------------- 551
            |                   :.::...|.::.|....| |:.|.:::|:                
  Rat   498 C-------------------HGMTPQNVYYTSSQQIHVGVLSPTIDDDDNRCLVDVNSRPRLIEC 543

  Fly   552 -------FNEQWRYEHQHIIHS-NTGMCLDHQGLKSLD---DAQVAPCDPHSESQRWTI 599
                   ....|::.....|.: .:..||:.|....::   ...:..|    ..|.|||
  Rat   544 SYAKAKRMKLHWQFSQGGSIQNRKSKRCLELQENSDMEFGFQLVLQKC----SGQHWTI 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 132/314 (42%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 23/161 (14%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 132/314 (42%)
beta-trefoil_Ricin_GALNT18 461..602 CDD:467353 23/165 (14%)

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