DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8160 and Ubqln2

DIOPT Version :8

Sequence 1:NP_611031.3 Gene:CG8160 / 36701 FlyBaseID:FBgn0034011 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001101721.1 Gene:Ubqln2 / 317396 RGDID:1563566 Length:638 Species:Rattus norvegicus

Alignment Length:23 Identity:9/24 (38%)
Similarity:14/24 (58%) Gaps:0/24 (0%)


  Fly    36 SGQSGYGSSPSGYGGSASQSGQG 58
            :.|..:|.:|....||:|.||:|
  Rat   294 AAQEQFGGNPFATVGSSSSSGEG 316

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8160NP_611031.3 None
Ubqln2NP_001101721.1 UBQ 33..103 CDD:214563
hPLIC_N 33..103 CDD:176403
STI1 194..227 CDD:128966
STI1 393..440 CDD:128966
UBA_PLICs 595..634 CDD:270582
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 OOG5_127163
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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