DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and AT1G02620

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001318907.1 Gene:AT1G02620 / 839269 AraportID:AT1G02620 Length:122 Species:Arabidopsis thaliana


Alignment Length:139 Identity:28/139 - (20%)
Similarity:46/139 - (33%) Gaps:39/139 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RCRLCDSADHIW---VPCFSLGGGVELTPSHLETITLISDIVIRYETDFSSVV-CSYCLLKIEEF 119
            :||    .|..|   .||.|               |.:|.:..|...:..::: ...|||||...
plant    89 QCR----GDSYWSKCPPCIS---------------TAVSGLRRRCPRNKGAIIWYDQCLLKISSV 134

  Fly   120 TVLRDVWKSKDKERHNWDEPS--------TKPKLPEISIKAAAMTDASTQTDSSDQLIAVSSAEV 176
            .....:....|....|.:..|        |...|.:::.||:...:.     ...||:..::.  
plant   135 ASFNKIDYENDFYLSNPNNMSDRGLFNKETSALLEKLAYKASDRNNL-----DGKQLVLYAAG-- 192

  Fly   177 PESVAGSKK 185
             |...|:||
plant   193 -EKRIGTKK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 24/126 (19%)
AT1G02620NP_001318907.1 SAR <12..121 CDD:197556 10/50 (20%)

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