DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf6 and arl9

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001038852.1 Gene:arl9 / 751670 ZFINID:ZDB-GENE-060825-210 Length:241 Species:Danio rerio


Alignment Length:135 Identity:45/135 - (33%)
Similarity:78/135 - (57%) Gaps:7/135 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RILMLGLDAAGKTTILYKLKLG---QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRH 76
            ::|:||||.||||::|:....|   |.|:  ||.|||..::..::::....::||.:|:|..||.
Zfish    75 QVLVLGLDGAGKTSLLHCFATGSLEQDVS--PTQGFNAVSINKEDLQIEFLEIGGSEKLREYWRM 137

  Fly    77 YYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141
            |.:..:.|:||||.:|.:|...|:..|.::::.......::|  |||||:..|....::.|.|.|
Zfish   138 YLSKARVLVFVVDSSDPERFPLAKHHLQQLLSADPGLPLVLL--ANKQDVSGARGITDLYEALDL 200

  Fly   142 TRIRD 146
            ..:.|
Zfish   201 GNVGD 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 45/135 (33%)
arl9NP_001038852.1 P-loop containing Nucleoside Triphosphate Hydrolases 75..239 CDD:476819 45/135 (33%)

Return to query results.
Submit another query.