DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl5c

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001037909.1 Gene:arl5c / 733518 XenbaseID:XB-GENE-5898153 Length:179 Species:Xenopus tropicalis


Alignment Length:174 Identity:82/174 - (47%)
Similarity:119/174 - (68%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSK---IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
            ||.:.::   ||||:|.:::::|||.||||||||:..:.:.|.|.||:|.|||.:..:|..|.:|
 Frog     1 MGNIFTRIMSIFGNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTAPTIGSNVEEIISRNTHFLMW 65

  Fly    63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLP 127
            |:|||:.:|..|..||:.|:.:|.|:|..||:|:.|.|.||::::...|::||.|||||||||:.
 Frog    66 DIGGQETLRATWNSYYSNTEFVILVIDSTDRERLPETREELYKMLAHEELKDAAILIFANKQDVK 130

  Fly   128 DAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171
            |:|...||...|.|..||||.|::|..||.:|:||..||.||.|
 Frog   131 DSMTASEISSSLALGAIRDRAWHIQGCCALTGEGLPAGLDWLKS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 82/174 (47%)
arl5cNP_001037909.1 Arl5_Arl8 3..175 CDD:133353 80/172 (47%)

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