DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl8bb

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001313407.1 Gene:arl8bb / 562445 ZFINID:ZDB-GENE-080516-10 Length:186 Species:Danio rerio


Alignment Length:171 Identity:58/171 - (33%)
Similarity:98/171 - (57%) Gaps:1/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQD 68
            :..:|..:||.:.::||..:||||.:..:..|| :...|||||||:..||..||...:||:|||.
Zfish    12 IRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKVTKGNVTIKIWDIGGQP 76

  Fly    69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPH 133
            :.|.:|..|..|...::::||.|||::::.:|.|||.:::..:::...:|:..||:||..|:...
Zfish    77 RFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLASALDEK 141

  Fly   134 EIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
            ::.|||.|:.|:||............|.:...|.||..:.|
Zfish   142 QLIEKLNLSAIQDREICCYSISCKEQDNIDITLQWLIQHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 57/169 (34%)
arl8bbNP_001313407.1 Arl10_like 22..180 CDD:206724 54/157 (34%)

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