DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and sar1b

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001019548.1 Gene:sar1b / 554177 ZFINID:ZDB-GENE-040426-1958 Length:198 Species:Danio rerio


Alignment Length:175 Identity:59/175 - (33%)
Similarity:90/175 - (51%) Gaps:20/175 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KEMRILMLGLDAAGKTTILYKLK---LGQSVTTI-PTVGFNVETVTYKNVKFNVWDVGGQDKIRP 72
            |..:::.||||.|||||:|:.||   |||.|.|: ||    .|.:|...:.|..:|:||..:.|.
Zfish    24 KSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPT----SEELTIAGMTFTTFDLGGHAQARR 84

  Fly    73 LWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQE 137
            :|::|.....|::|:|||.|..|:.|::|||..::.|..:.:..|||..||.|.|:|:...:::|
Zfish    85 VWKNYLPAINGIVFLVDCIDHGRLAESKTELDALMTDETIGNVPILILGNKIDKPEAISEEKLRE 149

  Fly   138 KLG------------LTRIRDRNWYVQPSCATSGDGLSEGLIWLT 170
            ..|            |..:..|...|.........|..||..||:
Zfish   150 IFGLYGQTTGKGNIPLKELNTRPLEVFMCSVLKRQGYGEGFRWLS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 59/175 (34%)
sar1bNP_001019548.1 Sar1 3..197 CDD:206645 59/175 (34%)

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