DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl8a

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001102541.1 Gene:Arl8a / 498234 RGDID:1565940 Length:186 Species:Rattus norvegicus


Alignment Length:176 Identity:59/176 - (33%)
Similarity:100/176 - (56%) Gaps:4/176 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KLL---SKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWD 63
            |||   ..:|..:||.:.::||..:||||.:..:..|| :...|||||||:..:|..||...:||
  Rat     7 KLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWD 71

  Fly    64 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPD 128
            :|||.:.|.:|..|..|...::::||.||:::|:.::.|||.:::..:::...:|:..||:||..
  Rat    72 IGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAG 136

  Fly   129 AMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
            |:...|:.||:.|:.|:||............|.:...|.||..:.|
  Rat   137 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 58/174 (33%)
Arl8aNP_001102541.1 Arl10_like 22..180 CDD:206724 52/157 (33%)

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