DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl5b

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:173 Identity:74/173 - (42%)
Similarity:116/173 - (67%) Gaps:3/173 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKI---FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
            ||.:.:|:   |.|:|.:::::|||.|||||:||:..:.:.|.|.||:|.|||.:..||..|.:|
 Frog     1 MGLIFAKLWNFFCNQEHKVIIVGLDNAGKTTLLYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMW 65

  Fly    63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLP 127
            |:|||:.:|..|..||:.|:.:|.|||..||:|:...:.||:|::...::|.|.:||||||||:.
 Frog    66 DIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDLRKAAVLIFANKQDIK 130

  Fly   128 DAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLT 170
            ..|...:|.:.|.|:.|:|..|::|..||.:|:||.:||.|:|
 Frog   131 GCMSAADISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMT 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 74/173 (43%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 72/171 (42%)

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