DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl4a

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:169 Identity:76/169 - (44%)
Similarity:109/169 - (64%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-----TYKNVKFNVWD 63
            :||.:...:.:.|.:||||.|||||:||:|:..:.|.|:||.|||.|.:     ..|.|.|:.||
 Frog    11 ILSGLSPFQALHIAILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNAEKIKVSLGNSKTVTFHFWD 75

  Fly    64 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPD 128
            ||||:|:||||:.|...|.|::||||..|.:|::||:||||:|....|.:...:||.||||||.:
 Frog    76 VGGQEKLRPLWKSYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISENQGVPVLIVANKQDLRN 140

  Fly   129 AMKPHEIQEKLGLTRIRDRN-WYVQPSCATSGDGLSEGL 166
            ::...||::.|.|....... |::|.:||..||||.||:
 Frog   141 SLTLSEIEKLLALNEFGSSTPWHLQATCAIIGDGLREGI 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 76/169 (45%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 74/162 (46%)

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