DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and TRIM23

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001647.1 Gene:TRIM23 / 373 HGNCID:660 Length:574 Species:Homo sapiens


Alignment Length:159 Identity:90/159 - (56%)
Similarity:121/159 - (76%) Gaps:1/159 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHY 77
            |:|::.||||.|||||||:|||..:.:..|||:|||||||.|||:||.:|||||:.|:||||:||
Human   404 EIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHY 468

  Fly    78 YTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142
            |..||.::||||.:.||||.||.:||.:::.::|:|||::||||||||:..|:...||.|.|.|.
Human   469 YLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLH 533

  Fly   143 RI-RDRNWYVQPSCATSGDGLSEGLIWLT 170
            :: ..|:||:|...|.||.||.|||.||:
Human   534 KLCCGRSWYIQGCDARSGMGLYEGLDWLS 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 90/159 (57%)
TRIM23NP_001647.1 mRING-HC-C3HC3D_TRIM23_C-IX 28..77 CDD:438307
Bbox2_TRIM23_C-IX_rpt1 123..172 CDD:380831
Bbox2_TRIM23_C-IX_rpt2 174..223 CDD:380832
BBC 226..370 CDD:128778
ARF-like 390..574 90/159 (57%)
ARD1 406..574 CDD:206723 89/157 (57%)
Blue background indicates that the domain is not in the aligned region.

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