DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl11

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_001013451.1 Gene:Arl11 / 364396 RGDID:1308083 Length:173 Species:Rattus norvegicus


Alignment Length:165 Identity:72/165 - (43%)
Similarity:102/165 - (61%) Gaps:4/165 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYK-NVKFNVWDV 64
            ||.:.|:  |:| .:::|||||.|||||||||||..:.|.|:||||||||.:... :|...:||:
  Rat     1 MGSVNSR--GHK-AQVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDI 62

  Fly    65 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDA 129
            |||.::|..|:.|..|...|::|:|..|..|:.||..||..::.|..|.....|:.||||:.|||
  Rat    63 GGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDA 127

  Fly   130 MKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSE 164
            :...||:.:|.|.|.:|..|.::...|.:|.||.|
  Rat   128 LPLLEIRNRLDLERFQDHCWELRACSALTGQGLQE 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 72/165 (44%)
Arl11NP_001013451.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..167 CDD:476819 67/151 (44%)

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