DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl4ab

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:180 Identity:79/180 - (43%)
Similarity:112/180 - (62%) Gaps:14/180 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSK---IF----GNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY---- 54
            ||..||:   ||    ..:.:.|::||||.|||||:||:|:..:.|.|:||.|||.|.:..    
Zfish     1 MGNGLSEPHFIFPCLPSFQALHIVILGLDCAGKTTVLYRLRFNEFVNTVPTKGFNTEKIKVNLGP 65

  Fly    55 --KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAII 117
              :...|:.||||||:|:|||||.|.....||:||||..|.:|::||:||||:|...:|.....:
Zfish    66 KSRTATFHFWDVGGQEKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQENLGVPV 130

  Fly   118 LIFANKQDLPDAMKPHEIQEKLGLTRIRDRN-WYVQPSCATSGDGLSEGL 166
            |:.||||||..|:...|:::.|.|..:.... |::||:||..|:||.|||
Zfish   131 LVVANKQDLRSALPLSEVEQMLALNELGSHTPWHLQPACAIIGEGLQEGL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 79/180 (44%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 73/163 (45%)

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