DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl4c

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_796279.2 Gene:Arl4c / 320982 MGIID:2445172 Length:192 Species:Mus musculus


Alignment Length:172 Identity:80/172 - (46%)
Similarity:117/172 - (68%) Gaps:6/172 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-----TYKNVKFN 60
            ||.:.|.|...:.:.|:|||||:|||||:||:||..:.|.|:||:|||.|.:     |.|.:..:
Mouse     1 MGNISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCH 65

  Fly    61 VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQD 125
            .||||||:|:||||:.|...|.|:|:|||..|.||::||:||||::....|.:...:|:.|||||
Mouse    66 FWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQD 130

  Fly   126 LPDAMKPHEIQEKLGLTR-IRDRNWYVQPSCATSGDGLSEGL 166
            ||.::...||:::|.|.. |....::|||:||..|:||:||:
Mouse   131 LPKSLPVAEIEKQLALHELIPATTYHVQPACAIIGEGLTEGM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 80/172 (47%)
Arl4cNP_796279.2 Arl4_Arl7 11..192 CDD:206719 76/162 (47%)

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